BLASTX nr result

ID: Cephaelis21_contig00020609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020609
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306429.1| high mobility group family [Populus trichoca...   132   1e-28
gb|ABK94286.1| unknown [Populus trichocarpa]                          130   4e-28
gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirs...   125   1e-26
ref|XP_002890402.1| hypothetical protein ARALYDRAFT_472304 [Arab...   123   5e-26
ref|NP_001235312.1| uncharacterized protein LOC100499992 [Glycin...   123   5e-26

>ref|XP_002306429.1| high mobility group family [Populus trichocarpa]
           gi|222855878|gb|EEE93425.1| high mobility group family
           [Populus trichocarpa]
          Length = 144

 Score =  132 bits (331), Expect = 1e-28
 Identities = 69/126 (54%), Positives = 84/126 (66%), Gaps = 3/126 (2%)
 Frame = +2

Query: 86  MARGKSKADSRTADSNL---GVXXXXXXXXXXXXXXXXXXXXXSAFLVFMEGFRKEFKEE 256
           M  G+SK+DSR  D+ L   G                      SAF VFME FRK++KE 
Sbjct: 1   MKGGRSKSDSRNNDAKLKRKGAGAGTKASKKAAKDPNKPKRPASAFFVFMEDFRKQYKES 60

Query: 257 NPDNKSVAVVGKAGGEKWKSFSDEQKAPYVAKAEKRKQDYDRQMQAYNKKLEGGLDEESD 436
           +P+NKSVA VGKAGG+KWKS S+ +KAPY AKAEKRK +Y++ M AYNK+L GG D+ESD
Sbjct: 61  HPNNKSVAAVGKAGGDKWKSLSEAEKAPYAAKAEKRKFEYNKDMAAYNKRLAGGNDDESD 120

Query: 437 KSKSEV 454
           KSKSEV
Sbjct: 121 KSKSEV 126


>gb|ABK94286.1| unknown [Populus trichocarpa]
          Length = 144

 Score =  130 bits (327), Expect = 4e-28
 Identities = 68/126 (53%), Positives = 84/126 (66%), Gaps = 3/126 (2%)
 Frame = +2

Query: 86  MARGKSKADSRTADSNL---GVXXXXXXXXXXXXXXXXXXXXXSAFLVFMEGFRKEFKEE 256
           M  G+SK+DSR  D+ L   G                      SAF VFME FRK++KE 
Sbjct: 1   MKGGRSKSDSRNNDAKLKRKGAGAGTKASKKAAKDPNKPKRPASAFFVFMEDFRKQYKES 60

Query: 257 NPDNKSVAVVGKAGGEKWKSFSDEQKAPYVAKAEKRKQDYDRQMQAYNKKLEGGLDEESD 436
           +P+NKSVA VGKAGG+KWKS S+ +KAP+ AKAEKRK +Y++ M AYNK+L GG D+ESD
Sbjct: 61  HPNNKSVAAVGKAGGDKWKSLSEAEKAPFAAKAEKRKFEYNKDMAAYNKRLAGGNDDESD 120

Query: 437 KSKSEV 454
           KSKSEV
Sbjct: 121 KSKSEV 126


>gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirsutum]
          Length = 139

 Score =  125 bits (315), Expect = 1e-26
 Identities = 61/84 (72%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
 Frame = +2

Query: 206 SAFLVFMEGFRKEFKEENPDNKSVAVVGKAGGEKWKSFSDEQKAPYVAKAEKRKQDYDRQ 385
           SAF VFME FRK++KE NPDN+SV+ VGKAGGEKWKS +D +KAPYV KAEKRK +Y+++
Sbjct: 43  SAFFVFMEEFRKQYKEANPDNRSVSAVGKAGGEKWKSMTDAEKAPYVQKAEKRKSEYNKK 102

Query: 386 MQAYNKKLE-GGLDEESDKSKSEV 454
           MQAYN KL  GG D+ESDKSKSEV
Sbjct: 103 MQAYNLKLAGGGNDDESDKSKSEV 126


>ref|XP_002890402.1| hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp.
           lyrata] gi|297336244|gb|EFH66661.1| hypothetical protein
           ARALYDRAFT_472304 [Arabidopsis lyrata subsp. lyrata]
          Length = 141

 Score =  123 bits (309), Expect = 5e-26
 Identities = 69/126 (54%), Positives = 83/126 (65%), Gaps = 2/126 (1%)
 Frame = +2

Query: 83  IMARGKSKADSRTADSNLGVXXXXXXXXXXXXXXXXXXXXXSAFLVFMEGFRKEFKEENP 262
           IM  GKSK ++R A  ++                       SAF VFME FR+ +K+E+P
Sbjct: 2   IMKGGKSKTETRNAKLSV-TKKPAKGGKGAAKDPNKPKRPSSAFFVFMEDFRETYKKEHP 60

Query: 263 DNKSVAVVGKAGGEKWKSFSDEQKAPYVAKAEKRKQDYDRQMQAYNKKLEGG--LDEESD 436
            NKSVA VGKAGGEKWKS SD +KAPYVAKA+KRK +Y++ M+AYNKKLE G   DEESD
Sbjct: 61  KNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESD 120

Query: 437 KSKSEV 454
           KS SEV
Sbjct: 121 KSVSEV 126


>ref|NP_001235312.1| uncharacterized protein LOC100499992 [Glycine max]
           gi|255628371|gb|ACU14530.1| unknown [Glycine max]
          Length = 139

 Score =  123 bits (309), Expect = 5e-26
 Identities = 66/124 (53%), Positives = 85/124 (68%), Gaps = 5/124 (4%)
 Frame = +2

Query: 98  KSKADSRTADSNL---GVXXXXXXXXXXXXXXXXXXXXXSAFLVFMEGFRKEFKEENPDN 268
           K+K+D++ ADS L   G                      SAF VFM  FR++FK+E+P+N
Sbjct: 3   KAKSDAKAADSRLKRKGAGAGRKQSRKAAKDPNKPKRPPSAFFVFMSEFREQFKKEHPNN 62

Query: 269 KSVAVVGKAGGEKWKSFSDEQKAPYVAKAEKRKQDYDRQMQAYNKKLEG--GLDEESDKS 442
           KSVAVVGKAGGEKWKS SD +KAP+VA AEK+KQ+Y++ + AYNK+LEG    ++ESDKS
Sbjct: 63  KSVAVVGKAGGEKWKSLSDAEKAPFVATAEKKKQEYEKTISAYNKQLEGKNSEEDESDKS 122

Query: 443 KSEV 454
           KSEV
Sbjct: 123 KSEV 126


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