BLASTX nr result

ID: Cephaelis21_contig00020575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020575
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   404   e-110
ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   398   e-109
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   396   e-108
ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana] gi|334302...   379   e-103
emb|CAB45993.1| ATP-dependent RNA helicase like protein [Arabido...   379   e-103

>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  404 bits (1037), Expect = e-110
 Identities = 204/268 (76%), Positives = 232/268 (86%), Gaps = 1/268 (0%)
 Frame = -1

Query: 806 AVGQSSIADEVSQLIKKPMLETGICYDPEDFSHQLQSSVDILVATPGRLMDHISNTKGFT 627
           AVGQSSIADE+S+LIKKP  E GICYDP+D   +LQSSVDILVATPGRLMDHI+ TKGFT
Sbjct: 139 AVGQSSIADEISELIKKPEHEAGICYDPQDVLQELQSSVDILVATPGRLMDHITTTKGFT 198

Query: 626 LEHLSYLVVDETDRLLREAYQSWLPTVLQLAKRSSENFFHFDGNY-PSLFGSLKTIRRSS 450
           LEHL YLVVDETDRLLRE+YQSWLPTVL+L +   E+      N+ P   GSLKTIRR  
Sbjct: 199 LEHLCYLVVDETDRLLRESYQSWLPTVLKLTRPYDESLVPGVNNFLPCASGSLKTIRRCG 258

Query: 449 VERGLKGKLSPRLVKMVLSATLTQDPSKLAHLDLHHPLFLTTGEQRYQLPKQLQSFKVVC 270
           VERG KGK  PRL KMVLSATLTQDPSKLA L+LHHPLFLTTG++RYQLP++L+S+K++C
Sbjct: 259 VERGFKGKSYPRLAKMVLSATLTQDPSKLAQLNLHHPLFLTTGQRRYQLPEKLESYKLIC 318

Query: 269 ESKLKPLYLVALLQSLQGEKCIIFTSSVESTHRLCTLLNFFSDLKIEIKEYSRLQRQSVR 90
            SKLKPLYLVA+LQ L GEKCI+FTSSVESTHRLCTLLNFF DLK++IKEYS LQRQSVR
Sbjct: 319 VSKLKPLYLVAVLQHLGGEKCIVFTSSVESTHRLCTLLNFFGDLKVKIKEYSGLQRQSVR 378

Query: 89  SETLKTFRAGQVRVLVSSDAMTRGMDVE 6
           S+TLK FR G+++VLVSSDAMTRGMD+E
Sbjct: 379 SKTLKAFREGEIQVLVSSDAMTRGMDIE 406


>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  398 bits (1023), Expect = e-109
 Identities = 201/268 (75%), Positives = 230/268 (85%), Gaps = 1/268 (0%)
 Frame = -1

Query: 806 AVGQSSIADEVSQLIKKPMLETGICYDPEDFSHQLQSSVDILVATPGRLMDHISNTKGFT 627
           AVGQ+SIADE+S+LIK+P LE GICYDPED S +LQSSVDILVATPGRLMDHI+ TKGFT
Sbjct: 136 AVGQTSIADEISELIKRPKLEAGICYDPEDISLELQSSVDILVATPGRLMDHINTTKGFT 195

Query: 626 LEHLSYLVVDETDRLLREAYQSWLPTVLQLAKRSSENFFHFDGNY-PSLFGSLKTIRRSS 450
           L+HL YLVVDETDRLLREAYQSWLPTVLQL + S E+ F       PS FGS+ TIRR  
Sbjct: 196 LKHLRYLVVDETDRLLREAYQSWLPTVLQLTRSSDESLFPCGKTILPSTFGSMNTIRRCG 255

Query: 449 VERGLKGKLSPRLVKMVLSATLTQDPSKLAHLDLHHPLFLTTGEQRYQLPKQLQSFKVVC 270
           VERG KG+  PRLVK+VLSATLTQDPSKLA LDLHHPL LT G++RYQLP++L+SFK++C
Sbjct: 256 VERGFKGRSYPRLVKIVLSATLTQDPSKLALLDLHHPLLLTAGQRRYQLPEKLKSFKLIC 315

Query: 269 ESKLKPLYLVALLQSLQGEKCIIFTSSVESTHRLCTLLNFFSDLKIEIKEYSRLQRQSVR 90
           ESKLKPLYLVALL+ L GEKCI+FTSSVES HRLCTLLNFF DL+I+I EYS LQ Q VR
Sbjct: 316 ESKLKPLYLVALLRDLGGEKCIVFTSSVESAHRLCTLLNFFGDLQIKIGEYSGLQHQRVR 375

Query: 89  SETLKTFRAGQVRVLVSSDAMTRGMDVE 6
           S+TL+ FR G+++VL+SSD MTRGMDVE
Sbjct: 376 SKTLEEFRGGKIQVLISSDGMTRGMDVE 403


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score =  396 bits (1017), Expect = e-108
 Identities = 205/269 (76%), Positives = 233/269 (86%), Gaps = 2/269 (0%)
 Frame = -1

Query: 806 AVGQSSIADEVSQLIKKPMLETGICYDPEDFSHQLQSSVDILVATPGRLMDHISNTKGFT 627
           AVGQSSIADE+S+LIK+P LE GICYDP+DF  +LQSSVDILVATPGRLMDHI+ TKGFT
Sbjct: 136 AVGQSSIADEISELIKRPKLEAGICYDPDDFLVELQSSVDILVATPGRLMDHINFTKGFT 195

Query: 626 LEHLSYLVVDETDRLLREAYQSWLPTVLQL--AKRSSENFFHFDGNYPSLFGSLKTIRRS 453
           L+HL YLV+DETDRLLREAYQSWLPTVLQL  A  SS  F  +  N P   GSLKTIRR 
Sbjct: 196 LQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDSSIIFPSYISN-PCSDGSLKTIRRF 254

Query: 452 SVERGLKGKLSPRLVKMVLSATLTQDPSKLAHLDLHHPLFLTTGEQRYQLPKQLQSFKVV 273
            VERG KGK  PRL KMVLSATLTQDP KLA LDLHHPLFLTTG++RY+LP++L+S+ ++
Sbjct: 255 GVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPEKLESYMMI 314

Query: 272 CESKLKPLYLVALLQSLQGEKCIIFTSSVESTHRLCTLLNFFSDLKIEIKEYSRLQRQSV 93
           CESKLKPLYLVALLQSL  EKCI+FTSSVESTHRLC+LLNFF DL+++IKEYS LQRQS+
Sbjct: 315 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCSLLNFFEDLELKIKEYSGLQRQSL 374

Query: 92  RSETLKTFRAGQVRVLVSSDAMTRGMDVE 6
           RS+TL  FR G+++VLVSSDAMTRGMDVE
Sbjct: 375 RSKTLNAFRGGEIQVLVSSDAMTRGMDVE 403


>ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
           gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 1
           gi|332658259|gb|AEE83659.1| RNA helicase 1 [Arabidopsis
           thaliana]
          Length = 522

 Score =  379 bits (972), Expect = e-103
 Identities = 191/268 (71%), Positives = 224/268 (83%), Gaps = 1/268 (0%)
 Frame = -1

Query: 806 AVGQSSIADEVSQLIKKPMLETGICYDPEDFSHQLQSSVDILVATPGRLMDHISNTKGFT 627
           AVGQSSIA E+SQLIK P L+ GICYDP+D S  L+S+VDILVATPGRLMDHI+NTKGFT
Sbjct: 138 AVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFT 197

Query: 626 LEHLSYLVVDETDRLLREAYQSWLPTVLQLAKRSSENFF-HFDGNYPSLFGSLKTIRRSS 450
           LEHL YLVVDETDRLLREAYQSWLPTVLQL + S ++ F  F    PS FGSL+T+RR S
Sbjct: 198 LEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQS 257

Query: 449 VERGLKGKLSPRLVKMVLSATLTQDPSKLAHLDLHHPLFLTTGEQRYQLPKQLQSFKVVC 270
           VERG KGK  PRLVKMVLSATLTQDPSKL  LDLHHPLF+TTG  RY+LP++L+  +++C
Sbjct: 258 VERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLIC 317

Query: 269 ESKLKPLYLVALLQSLQGEKCIIFTSSVESTHRLCTLLNFFSDLKIEIKEYSRLQRQSVR 90
           E+ +KP+YLVALL+S +GEKCIIFTSSVE+T RLC LLNFF D KI+ KEYS    QS+R
Sbjct: 318 ETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLR 377

Query: 89  SETLKTFRAGQVRVLVSSDAMTRGMDVE 6
           S+ LK FR G ++VLV+SDA+TRGMDV+
Sbjct: 378 SKELKAFRKGDIQVLVASDALTRGMDVK 405


>emb|CAB45993.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana]
           gi|7268333|emb|CAB78627.1| ATP-dependent RNA helicase
           like protein [Arabidopsis thaliana]
          Length = 474

 Score =  379 bits (972), Expect = e-103
 Identities = 191/268 (71%), Positives = 224/268 (83%), Gaps = 1/268 (0%)
 Frame = -1

Query: 806 AVGQSSIADEVSQLIKKPMLETGICYDPEDFSHQLQSSVDILVATPGRLMDHISNTKGFT 627
           AVGQSSIA E+SQLIK P L+ GICYDP+D S  L+S+VDILVATPGRLMDHI+NTKGFT
Sbjct: 90  AVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFT 149

Query: 626 LEHLSYLVVDETDRLLREAYQSWLPTVLQLAKRSSENFF-HFDGNYPSLFGSLKTIRRSS 450
           LEHL YLVVDETDRLLREAYQSWLPTVLQL + S ++ F  F    PS FGSL+T+RR S
Sbjct: 150 LEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQS 209

Query: 449 VERGLKGKLSPRLVKMVLSATLTQDPSKLAHLDLHHPLFLTTGEQRYQLPKQLQSFKVVC 270
           VERG KGK  PRLVKMVLSATLTQDPSKL  LDLHHPLF+TTG  RY+LP++L+  +++C
Sbjct: 210 VERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLIC 269

Query: 269 ESKLKPLYLVALLQSLQGEKCIIFTSSVESTHRLCTLLNFFSDLKIEIKEYSRLQRQSVR 90
           E+ +KP+YLVALL+S +GEKCIIFTSSVE+T RLC LLNFF D KI+ KEYS    QS+R
Sbjct: 270 ETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLR 329

Query: 89  SETLKTFRAGQVRVLVSSDAMTRGMDVE 6
           S+ LK FR G ++VLV+SDA+TRGMDV+
Sbjct: 330 SKELKAFRKGDIQVLVASDALTRGMDVK 357


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