BLASTX nr result

ID: Cephaelis21_contig00020567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020567
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD45561.1| reverse transcriptase [Elaeis guineensis]              82   5e-14
emb|CAD45562.1| reverse transcriptase [Elaeis guineensis]              79   4e-13
emb|CAD45564.1| reverse transcriptase [Elaeis guineensis]              78   9e-13
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    70   2e-10
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    69   4e-10

>emb|CAD45561.1| reverse transcriptase [Elaeis guineensis]
          Length = 137

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/95 (45%), Positives = 61/95 (64%)
 Frame = -2

Query: 299 CTFLNKLFTWIICDRLSPILSSLISKE*LAFLKGLELSDNVLLAQEVTQQINW*IRGHNM 120
           C  + K+   +  DRL+ IL  +IS+   AF+KG  + +N+ LAQE+TQ+ N    GHN+
Sbjct: 9   CNLIYKIIARLFNDRLASILPLIISENQGAFVKGRNILENISLAQELTQEFNRKCYGHNV 68

Query: 119 ILKLDMMKAFDRVSWPFLDSLLLTFRFDCFFVNLI 15
           I+KLDM KA+DR+ W FL  +LL F F   +VN I
Sbjct: 69  IIKLDMGKAYDRLEWDFLFQVLLRFGFHPGWVNYI 103


>emb|CAD45562.1| reverse transcriptase [Elaeis guineensis]
          Length = 137

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/95 (44%), Positives = 60/95 (63%)
 Frame = -2

Query: 299 CTFLNKLFTWIICDRLSPILSSLISKE*LAFLKGLELSDNVLLAQEVTQQINW*IRGHNM 120
           C  + K+   +  DRL+ IL  +IS+   AF+KG  + +N+ LAQE+TQ+ N    GHN+
Sbjct: 9   CNLIYKIIARLFNDRLASILPLIISENQGAFVKGRNILENISLAQELTQEFNRKCYGHNV 68

Query: 119 ILKLDMMKAFDRVSWPFLDSLLLTFRFDCFFVNLI 15
           I+KLDM KA+D + W FL  +LL F F   +VN I
Sbjct: 69  IIKLDMGKAYDWLEWDFLFQVLLRFGFHPGWVNYI 103


>emb|CAD45564.1| reverse transcriptase [Elaeis guineensis]
          Length = 137

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/95 (43%), Positives = 60/95 (63%)
 Frame = -2

Query: 299 CTFLNKLFTWIICDRLSPILSSLISKE*LAFLKGLELSDNVLLAQEVTQQINW*IRGHNM 120
           C  + K+   +  DRL+ IL  +IS+   AF+KG  + +N+ LAQE+TQ+ N    GHN+
Sbjct: 9   CNLIYKIIARLFNDRLASILPLIISENQGAFVKGRNILENISLAQELTQEFNRKCYGHNV 68

Query: 119 ILKLDMMKAFDRVSWPFLDSLLLTFRFDCFFVNLI 15
           I+K DM +A+DR+ W FL  +LL F F   +VN I
Sbjct: 69  IIKPDMGEAYDRLEWDFLFQVLLRFGFHPGWVNYI 103


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
 Frame = -2

Query: 299 CTFLNKLFTWIICDRLSPILSSLISKE*LAFLKGLELSDNVLLAQEVTQQINW*IRGHNM 120
           C  L KL + ++ +RL  IL ++IS    AF+ G  ++DNVLLA E+   +    +G   
Sbjct: 91  CNVLYKLISKVLANRLKKILPNIISNSQSAFVPGRLITDNVLLAYEIVHHLKSIKKGAGG 150

Query: 119 I--LKLDMMKAFDRVSWPFLDSLLLTFRFDCFFVNLIM 12
           +  +KLDM KA+DRV W FL++++    FD  +V LIM
Sbjct: 151 LAAIKLDMSKAYDRVEWSFLENMMRKMGFDEKWVQLIM 188


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/98 (43%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
 Frame = -2

Query: 299 CTFLNKLFTWIICDRLSPILSSLISKE*LAFLKGLELSDNVLLAQEVTQQINW*IRGHN- 123
           C  L KL +  I  RL   L  +IS+   AF+ G  ++DN L+A EV   +    R    
Sbjct: 514 CNVLYKLMSKAIVMRLKSFLPEIISENQSAFVPGRLITDNALIAMEVFHSMKNRNRSRKG 573

Query: 122 -MILKLDMMKAFDRVSWPFLDSLLLTFRFDCFFVNLIM 12
            + +KLDM KA+DRV W FL  LLLT  FD  +VNLIM
Sbjct: 574 TIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIM 611


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