BLASTX nr result

ID: Cephaelis21_contig00020545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020545
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EFW95686.1| hypothetical protein HPODL_3020 [Ogataea parapoly...    63   6e-08
ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula] ...    62   2e-07

>gb|EFW95686.1| hypothetical protein HPODL_3020 [Ogataea parapolymorpha DL-1]
          Length = 2087

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 20/239 (8%)
 Frame = -2

Query: 660 SSGNNMYQNRYQNSDQGSLGNSAV------SNLKSSPKEKKSDIVHKGARVGWGTGRGRF 499
           SSG++     Y+NS   S G+S+       S+ +S+     S      +R   G   G+ 
Sbjct: 111 SSGSS--STSYRNSSSASTGSSSTLSSLSASSTRSASSTAASSYYSASSRQTSGQTSGQT 168

Query: 498 DNSKVQACQSTALKLYAQNQGGNRCSRWGNRDEGSWRKSDRRSASSDGSWENIATSRAST 319
             S+  + QS+A    A N   +  S   N    +   +  RSASS+GS  +  +S  S 
Sbjct: 169 TVSRSSSSQSSASS-QASNGSSSASSASSNASNSA---TTARSASSNGSGSSSRSSSGSG 224

Query: 318 AWMPRGPISSASDGQKSYDGGQYVP--------------SASSVGSWENSTTSSASTAWM 181
           +        S+S    + +    VP              S+S+  +  +ST++S+++ + 
Sbjct: 225 SGSSTATSGSSSSSSATSNSAAQVPWHWRKLFQLWLSYASSSATSNSNSSTSASSNSGYA 284

Query: 180 LSQSISSASYGQQSYGRGQYVPPASSAGSWQNSATSNASIAWMPSRPISSASVGQQSYG 4
            S + SS+SYG  S G G     ++S+GS   S+T+ AS +   +   SSA+    SYG
Sbjct: 285 SSAATSSSSYGSTSSGSGSSSSGSASSGSSYGSSTTPASSSSSSAVSGSSAATSGSSYG 343


>ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula]
            gi|355507144|gb|AES88286.1| 5'-3' exoribonuclease
            [Medicago truncatula]
          Length = 866

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 17/134 (12%)
 Frame = -2

Query: 780  CLCYKLPED-CDHKHHLLEGVKIPEKTMTEANVVAATLWHESS------GNNMYQNRYQN 622
            C+ Y+ P     H  HLL GV +PEKT+ E ++    LWH+ S      G    Q+ ++N
Sbjct: 696  CVKYEHPVGGTSHVQHLLCGVNLPEKTIFENDINETVLWHDQSQQYSCFGRANNQDNWRN 755

Query: 621  SD-QGSLG----NSAVSNLKSSPKEKKSDIVHKGARVGWGTGRG---RFDNSKVQACQST 466
            S+ +G++     NS     +S  +    + +HKGA VGWG+GRG   R D+  +    S+
Sbjct: 756  SNKEGNVSKFHPNSTSFGGRSFSRNAPPESIHKGAGVGWGSGRGKSERIDHETINERMSS 815

Query: 465  ALKLYAQ--NQGGN 430
                + Q  + GG+
Sbjct: 816  FSPFHKQPNDHGGS 829


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