BLASTX nr result

ID: Cephaelis21_contig00020525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020525
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   49   8e-07
gb|ABW81094.1| RT6non-ltr [Cleome spinosa]                             51   2e-06
emb|CAN70261.1| hypothetical protein VITISV_002224 [Vitis vinifera]    55   6e-06

>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 49.3 bits (116), Expect(2) = 8e-07
 Identities = 23/42 (54%), Positives = 32/42 (76%)
 Frame = -1

Query: 233 FALLINEEYLGFFKSTRGLCQRDPLSPALFVIAVELLSRSLN 108
           F++ IN E  G+FK  RGL Q DPLSP LF++++E+LSR L+
Sbjct: 85  FSVSINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLSRMLD 126



 Score = 28.5 bits (62), Expect(2) = 8e-07
 Identities = 11/17 (64%), Positives = 16/17 (94%)
 Frame = -3

Query: 60  PQITYLSYADDLIIFTS 10
           P IT+L++ADD++IFTS
Sbjct: 143 PVITHLAFADDIMIFTS 159


>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
          Length = 459

 Score = 50.8 bits (120), Expect(2) = 2e-06
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = -1

Query: 233 FALLINEEYLGFFKSTRGLCQRDPLSPALFVIAVELLSRSLN 108
           F++ IN E  G FK  RGL Q DPLSP LF+IA+E+LSR L+
Sbjct: 2   FSININGELTGLFKGKRGLRQGDPLSPYLFIIAMEVLSRKLD 43



 Score = 25.8 bits (55), Expect(2) = 2e-06
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 72  CLNYPQITYLSYADDLIIFT 13
           C N P +T+L +ADDL+IF+
Sbjct: 57  CAN-PLLTHLIFADDLVIFS 75


>emb|CAN70261.1| hypothetical protein VITISV_002224 [Vitis vinifera]
          Length = 430

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = -1

Query: 236 NFALLINEEYLGFFKSTRGLCQRDPLSPALFVIAVELLSRSLNLLTENFKFSSFSVS 66
           +F++LIN   +GFF+S++GL QRDP+SP LFVIA+E LSR +         S F VS
Sbjct: 201 SFSILINGSPIGFFQSSKGLRQRDPISPYLFVIAMEALSRLILRAQVGGFISGFKVS 257


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