BLASTX nr result
ID: Cephaelis21_contig00020479
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00020479
(1311 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2... 169 1e-39
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2... 158 3e-36
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 150 7e-34
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 142 2e-31
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 142 2e-31
>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
predicted protein [Populus trichocarpa]
Length = 349
Score = 169 bits (428), Expect = 1e-39
Identities = 111/321 (34%), Positives = 163/321 (50%), Gaps = 8/321 (2%)
Frame = -2
Query: 947 MKIGHWNIRGLNSPLKQNEVKNLLAKHHLDVFGILECKMN*TKVEELMQL*FPGWSQCNN 768
M IG WNIRGLN P+K +E++ L+ + + +FG++E ++ + + QL WS N
Sbjct: 1 MIIGCWNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYN 60
Query: 767 FALCRLGRILILWQVSRVAVVVLEIQPQFIHLSVTCKVIVATFLVTFVYALYSITTRRPL 588
+ GRI + W V V V + Q IH+SVT +F + +Y + + R L
Sbjct: 61 YDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREAL 120
Query: 587 *EKLMS-FVSVRSSPWMLLGDFNNILFDDKRINGSLVTPYKTRDFLNCLLQLGLTDLNLV 411
++S S+PW+L+GDFN I ++ GS C+ + + DL
Sbjct: 121 WSDIVSRSDGWESTPWILMGDFNAIRNQSDKLGGSTTWAGTMHRLDTCIREAKVDDLWYS 180
Query: 410 GNRLTWSN----GVVWSKLDRVLVNSSFLQLDQNFVLN---FLNVGFASDHSSCVVNSEG 252
G TWSN ++ KLDRVLVN + + NF L+ FL G SDHS VV G
Sbjct: 181 GMHYTWSNQCPENLIMRKLDRVLVNEKW---NLNFPLSEARFLPSGM-SDHSPMVVKVIG 236
Query: 251 VVNSTERRKMFQFFDMWSNHPDFIQLVQDTWVSARVHGTRKFILCKKIKSLKAPLK*LNQ 72
N +K F+FFDMW +H +F+ LV+ W G + LC K++ K LK N
Sbjct: 237 --NDQNIKKPFRFFDMWMDHDEFMPLVKKVW-DQNSGGCPMYQLCCKLRKQKQELKLFNM 293
Query: 71 KHFSHISSRVKRVKEALEEAK 9
HFS+IS RVK K +++A+
Sbjct: 294 AHFSNISDRVKDAKNEMDKAQ 314
>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
predicted protein [Populus trichocarpa]
Length = 819
Score = 158 bits (400), Expect = 3e-36
Identities = 106/311 (34%), Positives = 158/311 (50%), Gaps = 6/311 (1%)
Frame = -2
Query: 923 RGLNSPLKQNEVKNLLAKHHLDVFGILECKMN*TKVEELMQL*FPGWSQCNNFALCRLGR 744
RGLN P+K +E++ L+ + + +FG++E ++ + + QL WS N+ GR
Sbjct: 386 RGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGR 445
Query: 743 ILILWQVSRVAVVVLEIQPQFIHLSVTCKVIVATFLVTFVYALYSITTRRPL*EKLMS-F 567
I + W V V V + Q IH+SVT +F + +Y + + R L ++S
Sbjct: 446 IWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRS 505
Query: 566 VSVRSSPWMLLGDFNNILFDDKRINGSLVTPYKTRDFLN-CLLQLGLTDLNLVGNRLTWS 390
S+ W+L+GDFN I R+ GS T T D L+ C+ + + DL G TWS
Sbjct: 506 DGWESTLWILIGDFNAIRNQSDRLGGS-TTWAGTMDRLDTCIREAKVDDLRYSGMHYTWS 564
Query: 389 N----GVVWSKLDRVLVNSSFLQLDQNFVLNFLNVGFASDHSSCVVNSEGVVNSTERRKM 222
N ++ KLDRVLVN + FL G SDHS VV G N ++K
Sbjct: 565 NQCPENLIMRKLDRVLVNEKWNLKFPLSEARFLPSGM-SDHSPMVVKVIG--NDQNKKKP 621
Query: 221 FQFFDMWSNHPDFIQLVQDTWVSARVHGTRKFILCKKIKSLKAPLK*LNQKHFSHISSRV 42
F+FFDMW +H +F+ LV+ W G + LC K++ LK LK N HFS+IS RV
Sbjct: 622 FRFFDMWMDHDEFMPLVKKVW-DQNSRGCPMYQLCCKLRKLKQELKLFNMAHFSNISDRV 680
Query: 41 KRVKEALEEAK 9
+ K +++A+
Sbjct: 681 RDAKNKMDKAQ 691
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 150 bits (379), Expect = 7e-34
Identities = 104/316 (32%), Positives = 166/316 (52%), Gaps = 12/316 (3%)
Frame = -2
Query: 932 WNIRGLNSPLKQNEVKNLLAKHHLDVFGILECKMN*TKVEELMQL*FPGWSQCNNFALCR 753
WNIRG N+ ++ K + + G++E + K + + PGWS N+A
Sbjct: 8 WNIRGFNNVSHRSGFKKWVKANKPIFGGVIETHVKQPKDRKFINALLPGWSFVENYAFSD 67
Query: 752 LGRILILWQVSRVAVVVLEIQPQFIHLSVTCKVIV----ATFLVTFVYALYSITTRRPL* 585
LG+I ++W S V VVV+ Q I TC+V++ + +V+ VYA + +R+ L
Sbjct: 68 LGKIWVMWDPS-VQVVVVAKSLQMI----TCEVLLPGSPSWIIVSVVYAANEVASRKELW 122
Query: 584 EKLMSFVS---VRSSPWMLLGDFNNILFDDKRING-SLVTPYKTRDFLNCLLQLGLTDLN 417
++++ V + PW++LGDFN +L + N SL RDF +CLL L+DL
Sbjct: 123 IEIVNMVVSGIIGDRPWLVLGDFNQVLNPQEHSNPVSLNVDINMRDFRDCLLAAELSDLR 182
Query: 416 LVGNRLTWSNGV----VWSKLDRVLVNSSFLQLDQNFVLNFLNVGFASDHSSCVVNSEGV 249
GN TW N V K+DR+LVN S+ L + + F ++ F SDH SC V E
Sbjct: 183 YKGNTFTWWNKSHTTPVAKKIDRILVNDSWNALFPSSLGIFGSLDF-SDHVSCGVVLEET 241
Query: 248 VNSTERRKMFQFFDMWSNHPDFIQLVQDTWVSARVHGTRKFILCKKIKSLKAPLK*LNQK 69
S + ++ F+FF+ + DF+ LV+D W + V G+ F + KK+K+LK P+K ++
Sbjct: 242 --SIKAKRPFKFFNYLLKNLDFLNLVRDNWFTLNVVGSSMFRVSKKLKALKKPIKDFSRL 299
Query: 68 HFSHISSRVKRVKEAL 21
++S + R K + L
Sbjct: 300 NYSELEKRTKEAHDFL 315
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 142 bits (358), Expect = 2e-31
Identities = 103/312 (33%), Positives = 161/312 (51%), Gaps = 11/312 (3%)
Frame = -2
Query: 944 KIGHWNIRGLNSPLKQNEVKNLLAKHHLDVFGILECKMN*TKVEELMQL*FPGWSQCNNF 765
K+ WN+RG N + K + G++E + K ++ + PGWS N+
Sbjct: 4 KLFCWNVRGFNISSHRRGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPGWSFVENY 63
Query: 764 ALCRLGRILILWQVSRVAVVVLEIQPQFIHLSVTCKVIV----ATFLVTFVYALYSITTR 597
LG+I +LW S V VVV+ Q I TC++++ + F+V+ VYA TR
Sbjct: 64 EFSVLGKIWVLWDPS-VKVVVIGRSLQMI----TCELLLPDSPSWFVVSIVYASNEEGTR 118
Query: 596 RPL*EKLMSFVS---VRSSPWMLLGDFNNILFDDKRINGSLVTPYKTRDFLNCLLQLGLT 426
+ L +L+ V W++LGDFN IL + IN ++ K R F +CLL L
Sbjct: 119 KELWNELVQLALSPVVVGRSWIVLGDFNQILNPESAINANIGR--KIRAFRSCLLDSDLY 176
Query: 425 DLNLVGNRLTW----SNGVVWSKLDRVLVNSSFLQLDQNFVLNFLNVGFASDHSSCVVNS 258
DL G+ TW S+ + K+DR+LVN + L + NF F SDHSSC V
Sbjct: 177 DLVYKGSSYTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFGEPDF-SDHSSCEVVL 235
Query: 257 EGVVNSTERRKMFQFFDMWSNHPDFIQLVQDTWVSARVHGTRKFILCKKIKSLKAPLK*L 78
+ V +R F+FF+ + ++PDF+QL+++ W S V G+ + + KK+K LK P+
Sbjct: 236 DPAVLKAKRP--FRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKHLKLPICCF 293
Query: 77 NQKHFSHISSRV 42
+++++S I RV
Sbjct: 294 SRENYSDIEKRV 305
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 142 bits (358), Expect = 2e-31
Identities = 103/312 (33%), Positives = 161/312 (51%), Gaps = 11/312 (3%)
Frame = -2
Query: 944 KIGHWNIRGLNSPLKQNEVKNLLAKHHLDVFGILECKMN*TKVEELMQL*FPGWSQCNNF 765
K+ WN+RG N + K + G++E + K ++ + PGWS N+
Sbjct: 4 KLFCWNVRGFNISSHRRGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPGWSFVENY 63
Query: 764 ALCRLGRILILWQVSRVAVVVLEIQPQFIHLSVTCKVIV----ATFLVTFVYALYSITTR 597
LG+I +LW S V VVV+ Q I TC++++ + F+V+ VYA TR
Sbjct: 64 EFSVLGKIWVLWDPS-VKVVVIGRSLQMI----TCELLLPDSPSWFVVSIVYASNEEGTR 118
Query: 596 RPL*EKLMSFVS---VRSSPWMLLGDFNNILFDDKRINGSLVTPYKTRDFLNCLLQLGLT 426
+ L +L+ V W++LGDFN IL + IN ++ K R F +CLL L
Sbjct: 119 KELWNELVQLALSPVVVGRSWIVLGDFNQILNPESAINANIGR--KIRAFRSCLLDSDLY 176
Query: 425 DLNLVGNRLTW----SNGVVWSKLDRVLVNSSFLQLDQNFVLNFLNVGFASDHSSCVVNS 258
DL G+ TW S+ + K+DR+LVN + L + NF F SDHSSC V
Sbjct: 177 DLVYKGSSYTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFGEPDF-SDHSSCEVVL 235
Query: 257 EGVVNSTERRKMFQFFDMWSNHPDFIQLVQDTWVSARVHGTRKFILCKKIKSLKAPLK*L 78
+ V +R F+FF+ + ++PDF+QL+++ W S V G+ + + KK+K LK P+
Sbjct: 236 DPAVLKAKRP--FRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKHLKLPICCF 293
Query: 77 NQKHFSHISSRV 42
+++++S I RV
Sbjct: 294 SRENYSDIEKRV 305