BLASTX nr result

ID: Cephaelis21_contig00020442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020442
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containi...   149   9e-34
ref|XP_002524769.1| pentatricopeptide repeat-containing protein,...   128   3e-27
ref|XP_003553441.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-25
ref|XP_004147968.1| PREDICTED: pentatricopeptide repeat-containi...   113   1e-22
ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containi...   111   4e-22

>ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780
           [Vitis vinifera] gi|296086664|emb|CBI32299.3| unnamed
           protein product [Vitis vinifera]
          Length = 494

 Score =  149 bits (377), Expect = 9e-34
 Identities = 83/143 (58%), Positives = 100/143 (69%), Gaps = 4/143 (2%)
 Frame = -3

Query: 418 FILPNISALFLNKW----ITTKQDERDRVCTLKDELLDCNGDMAMVERVLEEKGFPLFRR 251
           + L ++  LF +K     +  +++ R +V  L+DEL+    D  MV RVLEEKG  LFR 
Sbjct: 38  YTLTSMIGLFSDKHSELDLRAREELRGKVSQLRDELVPSGDDSDMVVRVLEEKGESLFRS 97

Query: 250 YYDGSDVVELLKQLDSSPDLALQVFNWRRKQMDCGAPMTIEEYAKGINVAGKLKDIDLAE 71
           Y +GS  VELLKQL S P LALQVFNWRR Q D   PMT EEYAKGI+VAG+ K++DLA 
Sbjct: 98  YSNGSAFVELLKQLSSWPYLALQVFNWRRNQTDYSIPMTSEEYAKGISVAGRTKNVDLAV 157

Query: 70  ELFAEAANKKIKETSLYNALMGA 2
           ELF EAANK+IK TS YNALMGA
Sbjct: 158 ELFTEAANKQIKTTSTYNALMGA 180


>ref|XP_002524769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535953|gb|EEF37612.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 509

 Score =  128 bits (321), Expect = 3e-27
 Identities = 72/139 (51%), Positives = 93/139 (66%), Gaps = 3/139 (2%)
 Frame = -3

Query: 409 PNISALFLNKWITTK---QDERDRVCTLKDELLDCNGDMAMVERVLEEKGFPLFRRYYDG 239
           PNI +LF  ++       +D    V  L+DEL+    D     RVLEE+G  LFR   D 
Sbjct: 57  PNIISLFSRRFPVDNKAIEDLSKTVSHLRDELVQHAEDSDKFFRVLEEQGDSLFRMRSDR 116

Query: 238 SDVVELLKQLDSSPDLALQVFNWRRKQMDCGAPMTIEEYAKGINVAGKLKDIDLAEELFA 59
           S +VELL+QL S P LA++VFNWRRKQ +   PMT EEYAKGI +AG+ K++DLA E+FA
Sbjct: 117 SALVELLRQLVSLPHLAVEVFNWRRKQTEWSTPMTHEEYAKGITIAGRAKNVDLAIEIFA 176

Query: 58  EAANKKIKETSLYNALMGA 2
           EA +K+ K+T +YNALMGA
Sbjct: 177 EACSKRRKKTCIYNALMGA 195


>ref|XP_003553441.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g30780-like [Glycine max]
          Length = 504

 Score =  122 bits (305), Expect = 2e-25
 Identities = 73/195 (37%), Positives = 108/195 (55%)
 Frame = -3

Query: 586 MRRAWKLSLDAAQAGELFLKRGGSCFHKTPANSNSSTRARLMHEXXXXXXXXXXXQFILP 407
           MRR W+ S DA +  +L L      FH       + + A  +               ++P
Sbjct: 1   MRRVWRFSSDATRRAQLLLLLQSHYFHGFSNPKTTPSLATALSHHRNLNSVPNACSDLIP 60

Query: 406 NISALFLNKWITTKQDERDRVCTLKDELLDCNGDMAMVERVLEEKGFPLFRRYYDGSDVV 227
             +A   +   + K+D  ++   LK+EL+  + D A V  +L++    L +R+ DGS ++
Sbjct: 61  LFTAKSCS---SAKEDLINKASILKNELIRESSDSARVLSILDDNSDTLIQRHPDGSVLL 117

Query: 226 ELLKQLDSSPDLALQVFNWRRKQMDCGAPMTIEEYAKGINVAGKLKDIDLAEELFAEAAN 47
            L+ QL+S+P LALQVF+WRRK+ +   PM   EY+KGI  AG+  ++DLA +LF EAA 
Sbjct: 118 RLMNQLNSNPSLALQVFSWRRKRSNVENPMDAYEYSKGIKAAGRSGNVDLAVKLFKEAAV 177

Query: 46  KKIKETSLYNALMGA 2
           K IK TS YNALMGA
Sbjct: 178 KGIKTTSTYNALMGA 192


>ref|XP_004147968.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g30780-like [Cucumis sativus]
           gi|449494249|ref|XP_004159492.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g30780-like [Cucumis sativus]
          Length = 514

 Score =  113 bits (282), Expect = 1e-22
 Identities = 66/144 (45%), Positives = 93/144 (64%), Gaps = 7/144 (4%)
 Frame = -3

Query: 415 ILPNISALFLNKWITTKQDERDRVCTLKDELLDCNGDMAM-------VERVLEEKGFPLF 257
           ++ N+  LF NK       E   +C ++ ++L+ + ++ +       + ++LE+    L 
Sbjct: 58  LVANLIELFSNK---PDDHEILAICIMERKVLEVSHELILNSEDSNKIVKILEDSKDLLL 114

Query: 256 RRYYDGSDVVELLKQLDSSPDLALQVFNWRRKQMDCGAPMTIEEYAKGINVAGKLKDIDL 77
            ++ DGS  VELLKQL S P+LAL+VFNWRR+Q     P+T+EEYAKGI VAGK K IDL
Sbjct: 115 WKHTDGSAFVELLKQLGSQPNLALEVFNWRRRQGG-SFPLTVEEYAKGIAVAGKSKHIDL 173

Query: 76  AEELFAEAANKKIKETSLYNALMG 5
           A  LF EA+NK++K TS YNALMG
Sbjct: 174 AVGLFNEASNKRVKATSTYNALMG 197


>ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g30780-like [Glycine max]
          Length = 442

 Score =  111 bits (277), Expect = 4e-22
 Identities = 58/117 (49%), Positives = 83/117 (70%)
 Frame = -3

Query: 352 DRVCTLKDELLDCNGDMAMVERVLEEKGFPLFRRYYDGSDVVELLKQLDSSPDLALQVFN 173
           ++V  LK+EL+  + D A V+ +L++    LFRR+ +GS +++L+ QL+S+P LALQVF+
Sbjct: 13  NKVTILKNELIRDSCDSARVQTILDDSFDTLFRRHPNGSALLKLMNQLNSNPSLALQVFS 72

Query: 172 WRRKQMDCGAPMTIEEYAKGINVAGKLKDIDLAEELFAEAANKKIKETSLYNALMGA 2
           WRRK+ +   PM   EY+KGI  AG+  ++DLA +LF EAA K IK T  YNALMGA
Sbjct: 73  WRRKRSNAENPMDAYEYSKGIKAAGRSGNVDLAVKLFKEAAVKGIKTTGTYNALMGA 129


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