BLASTX nr result

ID: Cephaelis21_contig00020379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020379
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus commun...   171   1e-40
ref|XP_002311376.1| predicted protein [Populus trichocarpa] gi|2...   165   6e-39
ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifer...   153   2e-35
emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]   153   3e-35
ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidop...   134   1e-29

>ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 492

 Score =  171 bits (432), Expect = 1e-40
 Identities = 81/148 (54%), Positives = 110/148 (74%), Gaps = 1/148 (0%)
 Frame = -2

Query: 640 DELRGWVGWVKSRFRSLLIKLEELQGFCDPSPLEYVDVDLAAPNVVFYWGLQPSRTDIID 461
           DE+  WVGWVKSRFR+LL+KLE LQG CDPSP+EY D D++ PNVVFYWGL PSR++ ID
Sbjct: 345 DEVGDWVGWVKSRFRALLLKLEGLQGQCDPSPVEYADRDVSEPNVVFYWGLNPSRSNYID 404

Query: 460 INFVDEDFMKNMSNGYHVPPGRMKLSVVKASQLPKSIACNSGS-KGTKTHWRVLDSSQRK 284
           +  V+EDF++N+ +GYH    +++LS+VKA++LPK+   NSG+ K  K +W+V+D  QR 
Sbjct: 405 LESVEEDFLRNIYSGYHGTRRKLELSIVKAAELPKNAQFNSGNGKKMKAYWKVVDKEQR- 463

Query: 283 NPVHANSLPRDFVAFMATNGSAEYTSTG 200
            P ++  LP  FV ++ATNG  E  S G
Sbjct: 464 TPAYSQHLPGYFVGYLATNGDTECPSCG 491


>ref|XP_002311376.1| predicted protein [Populus trichocarpa] gi|222851196|gb|EEE88743.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  165 bits (418), Expect = 6e-39
 Identities = 78/148 (52%), Positives = 108/148 (72%), Gaps = 1/148 (0%)
 Frame = -2

Query: 640 DELRGWVGWVKSRFRSLLIKLEELQGFCDPSPLEYVDVDLAAPNVVFYWGLQPSRTDIID 461
           DEL  WVGWVKS FR LL+KLE +QGFCDP+P+EYVD+D + PNVVFYWGL  SR + + 
Sbjct: 335 DELGDWVGWVKSHFRCLLLKLEAVQGFCDPNPMEYVDMDASEPNVVFYWGLNRSRCNFVY 394

Query: 460 INFVDEDFMKNMSNGYHVPPGRMKLSVVKASQLPKSIACNSGS-KGTKTHWRVLDSSQRK 284
           I  V+EDF +++  GY+   G+M+LS+V+AS+LPK+   +SG+ K  K  W++LD +QR+
Sbjct: 395 IEPVEEDFSRSIYCGYYGIRGKMELSIVQASELPKNARFDSGNGKKMKACWKMLDYNQRR 454

Query: 283 NPVHANSLPRDFVAFMATNGSAEYTSTG 200
            P ++  LP  FV ++ +NG  EY STG
Sbjct: 455 TPAYSQHLPSYFVGYVESNGDTEYPSTG 482


>ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
           gi|296083219|emb|CBI22855.3| unnamed protein product
           [Vitis vinifera]
          Length = 563

 Score =  153 bits (387), Expect = 2e-35
 Identities = 74/144 (51%), Positives = 100/144 (69%), Gaps = 2/144 (1%)
 Frame = -2

Query: 640 DELRGWVGWVKSRFRSLLIKLEELQGFCDPSPLEYVDVDLAAPNVVFYWGLQPSRTDIID 461
           DEL  WVGWVKSRFR LL K+EE+QG CDP+P E++D D   PNVVF+WG+QP R +  D
Sbjct: 414 DELGDWVGWVKSRFRFLLAKVEEVQGLCDPNPTEFIDPDAGGPNVVFFWGVQPGRINFSD 473

Query: 460 INFVDEDFMKNMSN-GYHVPPGRMKLSVVKASQLPKSIACNSGSKG-TKTHWRVLDSSQR 287
           I+ V++DFM+N++N GY  PPG+M LSV+  SQLP     ++GS+  TK  WR+ +  Q 
Sbjct: 474 IDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGYAQLDTGSRNRTKACWRMFNYHQP 533

Query: 286 KNPVHANSLPRDFVAFMATNGSAE 215
           + PV +  LP  FV + AT+  A+
Sbjct: 534 RVPVFSQHLPLYFVGYAATDKDAK 557


>emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
          Length = 604

 Score =  153 bits (386), Expect = 3e-35
 Identities = 74/144 (51%), Positives = 100/144 (69%), Gaps = 2/144 (1%)
 Frame = -2

Query: 640 DELRGWVGWVKSRFRSLLIKLEELQGFCDPSPLEYVDVDLAAPNVVFYWGLQPSRTDIID 461
           DEL  WVGWVKSRFR LL K+EE+QG CDP+P E++D D   PNVVF+WG+QP R +  D
Sbjct: 455 DELGDWVGWVKSRFRFLLAKVEEVQGLCDPNPTEFIDPDAGEPNVVFFWGVQPGRINFSD 514

Query: 460 INFVDEDFMKNMSN-GYHVPPGRMKLSVVKASQLPKSIACNSGSKG-TKTHWRVLDSSQR 287
           I+ V++DFM+N++N GY  PPG+M LSV+  SQLP     ++GS+  TK  WR+ +  Q 
Sbjct: 515 IDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGYAXLDTGSRNRTKACWRMFNYHQP 574

Query: 286 KNPVHANSLPRDFVAFMATNGSAE 215
           + PV +  LP  FV + AT+  A+
Sbjct: 575 RVPVFSQHLPLYFVGYAATDKDAK 598


>ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
           lyrata] gi|297328320|gb|EFH58739.1| polynucleotide
           adenylyltransferase [Arabidopsis lyrata subsp. lyrata]
          Length = 507

 Score =  134 bits (338), Expect = 1e-29
 Identities = 68/139 (48%), Positives = 94/139 (67%), Gaps = 5/139 (3%)
 Frame = -2

Query: 640 DELRGWVGWVKSRFRSLLIKLEELQGFCDPSPLEYVDVDLAAPNVVFYWGLQPSRTDIID 461
           ++L  WVGWVKSRFR LL K+EE+ G CDP+P EYV+     PN+VFYWGLQ    ++ D
Sbjct: 356 EDLSDWVGWVKSRFRCLLSKIEEVYGICDPNPTEYVETYTKQPNIVFYWGLQLRTINVSD 415

Query: 460 INFVDEDFMKNMSNG-YHVPPGRMKLSVVKASQLPKSIAC---NSGSKGTKTHWRVLDSS 293
           I  V+ +F+KN+++G +  P GR++LSVVK SQLPK+  C   N   K TKT WR+ ++ 
Sbjct: 416 IESVETEFLKNLNSGSFQGPVGRIQLSVVKESQLPKNGECASNNRSKKVTKTCWRIRENK 475

Query: 292 QRKN-PVHANSLPRDFVAF 239
           Q  N PV+++ LP   V +
Sbjct: 476 QCNNVPVYSHHLPGYVVGY 494


Top