BLASTX nr result

ID: Cephaelis21_contig00020372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020372
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containin...   145   3e-33
ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containin...   142   2e-32
ref|NP_171642.2| zinc finger CCCH domain-containing protein 1 [A...   140   8e-32
ref|NP_196260.1| zinc finger CCCH domain-containing protein 51 [...   139   2e-31
ref|XP_002892071.1| zinc finger family protein [Arabidopsis lyra...   139   3e-31

>ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like
           [Cucumis sativus]
          Length = 322

 Score =  145 bits (367), Expect = 3e-33
 Identities = 62/73 (84%), Positives = 70/73 (95%)
 Frame = +1

Query: 1   TADKSDEEEDDSLPFACFICRQPFVAPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTLG 180
           T+++SDE+E+D+LPFACFICR+PFV PVVTKCKHYFCEHCALKHH KNKKCFVCNQPTLG
Sbjct: 247 TSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLG 306

Query: 181 IFNTAFEIRKRMS 219
           IFNTA EIRKRM+
Sbjct: 307 IFNTAHEIRKRMA 319


>ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Vitis
           vinifera] gi|297745423|emb|CBI40503.3| unnamed protein
           product [Vitis vinifera]
          Length = 331

 Score =  142 bits (359), Expect = 2e-32
 Identities = 60/74 (81%), Positives = 70/74 (94%)
 Frame = +1

Query: 10  KSDEEEDDSLPFACFICRQPFVAPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTLGIFN 189
           +SDE++DD+LPFACFICRQPFV PVVTKCKH+FCEHCAL+HH+KNKKCFVCNQPTLG+FN
Sbjct: 258 QSDEDDDDALPFACFICRQPFVDPVVTKCKHFFCEHCALRHHSKNKKCFVCNQPTLGMFN 317

Query: 190 TAFEIRKRMSTEGK 231
           TA EIRK+M+ E K
Sbjct: 318 TAHEIRKKMAAERK 331


>ref|NP_171642.2| zinc finger CCCH domain-containing protein 1 [Arabidopsis thaliana]
           gi|229621709|sp|Q8GX84.2|C3H1_ARATH RecName: Full=Zinc
           finger CCCH domain-containing protein 1; Short=AtC3H1
           gi|225897850|dbj|BAH30257.1| hypothetical protein
           [Arabidopsis thaliana] gi|332189154|gb|AEE27275.1| zinc
           finger CCCH domain-containing protein 1 [Arabidopsis
           thaliana]
          Length = 343

 Score =  140 bits (354), Expect = 8e-32
 Identities = 59/74 (79%), Positives = 68/74 (91%)
 Frame = +1

Query: 4   ADKSDEEEDDSLPFACFICRQPFVAPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTLGI 183
           ADK  +E++++LPFACFICR+PFV PVVTKCKHYFCEHCALKHHTKNKKCFVCNQPT+GI
Sbjct: 262 ADKDSDEDENALPFACFICREPFVDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTMGI 321

Query: 184 FNTAFEIRKRMSTE 225
           FN A EI+KRM+ E
Sbjct: 322 FNAAHEIKKRMAEE 335


>ref|NP_196260.1| zinc finger CCCH domain-containing protein 51 [Arabidopsis
           thaliana] gi|30681442|ref|NP_850780.1| zinc finger CCCH
           domain-containing protein 51 [Arabidopsis thaliana]
           gi|75334125|sp|Q9FNG6.1|C3H51_ARATH RecName: Full=Zinc
           finger CCCH domain-containing protein 51; Short=AtC3H51
           gi|9758422|dbj|BAB08964.1| unnamed protein product
           [Arabidopsis thaliana] gi|21618279|gb|AAM67329.1|
           unknown [Arabidopsis thaliana]
           gi|332003629|gb|AED91012.1| zinc finger CCCH
           domain-containing protein 51 [Arabidopsis thaliana]
           gi|332003630|gb|AED91013.1| zinc finger CCCH
           domain-containing protein 51 [Arabidopsis thaliana]
          Length = 378

 Score =  139 bits (351), Expect = 2e-31
 Identities = 58/74 (78%), Positives = 68/74 (91%)
 Frame = +1

Query: 4   ADKSDEEEDDSLPFACFICRQPFVAPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTLGI 183
           ADK  +E++++LPFACFICR+PF+ PVVTKCKHYFCEHCALKHHTKNKKCFVCNQPT+GI
Sbjct: 297 ADKDSDEDENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTMGI 356

Query: 184 FNTAFEIRKRMSTE 225
           FN A EI+KRM+ E
Sbjct: 357 FNAAHEIKKRMAEE 370


>ref|XP_002892071.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337913|gb|EFH68330.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score =  139 bits (349), Expect = 3e-31
 Identities = 58/74 (78%), Positives = 67/74 (90%)
 Frame = +1

Query: 4   ADKSDEEEDDSLPFACFICRQPFVAPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTLGI 183
           AD   +E++++LPFACFICR+PFV PVVTKCKHYFCEHCALKHHTKNKKCFVCNQPT+GI
Sbjct: 261 ADNDSDEDENALPFACFICREPFVDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTMGI 320

Query: 184 FNTAFEIRKRMSTE 225
           FN A EI+KRM+ E
Sbjct: 321 FNAAHEIKKRMAEE 334


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