BLASTX nr result

ID: Cephaelis21_contig00020318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020318
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519872.1| conserved hypothetical protein [Ricinus comm...   194   3e-47
ref|XP_004146119.1| PREDICTED: protein PAM68, chloroplastic-like...   192   1e-46
ref|NP_974571.1| uncharacterized protein [Arabidopsis thaliana] ...   189   1e-45
emb|CBI24589.3| unnamed protein product [Vitis vinifera]              185   1e-44
ref|XP_002266174.1| PREDICTED: protein PAM68, chloroplastic [Vit...   185   1e-44

>ref|XP_002519872.1| conserved hypothetical protein [Ricinus communis]
           gi|223540918|gb|EEF42476.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score =  194 bits (493), Expect = 3e-47
 Identities = 86/108 (79%), Positives = 97/108 (89%)
 Frame = +3

Query: 516 REAGVIPEIVTNRMMSRMAFSVGIPVFTGLLFFPLFYYLKAGLKIDVPTWIPFMVSSMCF 695
           ++AG+IPE+VTNRM+SRM FSVG+P+F GLLFFP FYYLK GLKIDVPTW+P++VS   F
Sbjct: 113 QDAGIIPEVVTNRMISRMGFSVGVPLFIGLLFFPFFYYLKVGLKIDVPTWVPYIVSFFFF 172

Query: 696 GTALLGVSYGIVSSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGGSKE 839
           GTALLGVSYGIVSSSWDPMREGSLLGWNEAQKNWPVFWQS WG   K+
Sbjct: 173 GTALLGVSYGIVSSSWDPMREGSLLGWNEAQKNWPVFWQSFWGRSGKK 220


>ref|XP_004146119.1| PREDICTED: protein PAM68, chloroplastic-like [Cucumis sativus]
           gi|449509526|ref|XP_004163614.1| PREDICTED: protein
           PAM68, chloroplastic-like [Cucumis sativus]
          Length = 213

 Score =  192 bits (488), Expect = 1e-46
 Identities = 86/107 (80%), Positives = 97/107 (90%)
 Frame = +3

Query: 519 EAGVIPEIVTNRMMSRMAFSVGIPVFTGLLFFPLFYYLKAGLKIDVPTWIPFMVSSMCFG 698
           E GVIPE+VTNRMMSRM F+VGIP+F GLLFFP FYYLK GLKIDVP+W+P +VS   FG
Sbjct: 107 EGGVIPEVVTNRMMSRMGFTVGIPLFIGLLFFPFFYYLKVGLKIDVPSWVPVIVSFFFFG 166

Query: 699 TALLGVSYGIVSSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGGSKE 839
           +ALLGVSYGIVSSSWDP+REGSLLGWNEAQKNWPVFW+SIWGG +K+
Sbjct: 167 SALLGVSYGIVSSSWDPLREGSLLGWNEAQKNWPVFWKSIWGGSNKK 213


>ref|NP_974571.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75098840|sp|O49668.1|PAM68_ARATH RecName:
           Full=Protein PAM68, chloroplastic; AltName:
           Full=PHOTOSYNTHESIS AFFECTED MUTANT 68; Flags: Precursor
           gi|2828285|emb|CAA16699.1| putative protein [Arabidopsis
           thaliana] gi|7268705|emb|CAB78912.1| putative protein
           [Arabidopsis thaliana] gi|119360097|gb|ABL66777.1|
           At4g19100 [Arabidopsis thaliana]
           gi|332658740|gb|AEE84140.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 214

 Score =  189 bits (479), Expect = 1e-45
 Identities = 84/107 (78%), Positives = 94/107 (87%)
 Frame = +3

Query: 516 REAGVIPEIVTNRMMSRMAFSVGIPVFTGLLFFPLFYYLKAGLKIDVPTWIPFMVSSMCF 695
           RE GVIPEIVTNRM+SRM F+VG+P+F GLLFFP FYYLK GLK+DVPTW+PF+VS + F
Sbjct: 107 RERGVIPEIVTNRMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVDVPTWVPFIVSFVFF 166

Query: 696 GTALLGVSYGIVSSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGGSK 836
           GTAL GVSYGIVSSSWDP+REGSLLGWNEA+KNWPVFWQS W    K
Sbjct: 167 GTALAGVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQSFWNSSDK 213


>emb|CBI24589.3| unnamed protein product [Vitis vinifera]
          Length = 136

 Score =  185 bits (470), Expect = 1e-44
 Identities = 84/107 (78%), Positives = 92/107 (85%)
 Frame = +3

Query: 519 EAGVIPEIVTNRMMSRMAFSVGIPVFTGLLFFPLFYYLKAGLKIDVPTWIPFMVSSMCFG 698
           E GVIPEIVTNRM+SRM FSVGIP+  GLLFFP FYYLK GLKIDVPTW+PF+VS   FG
Sbjct: 30  EEGVIPEIVTNRMISRMGFSVGIPLMIGLLFFPFFYYLKVGLKIDVPTWVPFIVSFFFFG 89

Query: 699 TALLGVSYGIVSSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGGSKE 839
           +ALLGVSYGIVSSSWDP+REGS LGW EAQ NWPVFWQS+WG   K+
Sbjct: 90  SALLGVSYGIVSSSWDPLREGSFLGWTEAQNNWPVFWQSLWGRSGKK 136


>ref|XP_002266174.1| PREDICTED: protein PAM68, chloroplastic [Vitis vinifera]
           gi|147866231|emb|CAN79943.1| hypothetical protein
           VITISV_021078 [Vitis vinifera]
          Length = 196

 Score =  185 bits (470), Expect = 1e-44
 Identities = 84/107 (78%), Positives = 92/107 (85%)
 Frame = +3

Query: 519 EAGVIPEIVTNRMMSRMAFSVGIPVFTGLLFFPLFYYLKAGLKIDVPTWIPFMVSSMCFG 698
           E GVIPEIVTNRM+SRM FSVGIP+  GLLFFP FYYLK GLKIDVPTW+PF+VS   FG
Sbjct: 90  EEGVIPEIVTNRMISRMGFSVGIPLMIGLLFFPFFYYLKVGLKIDVPTWVPFIVSFFFFG 149

Query: 699 TALLGVSYGIVSSSWDPMREGSLLGWNEAQKNWPVFWQSIWGGGSKE 839
           +ALLGVSYGIVSSSWDP+REGS LGW EAQ NWPVFWQS+WG   K+
Sbjct: 150 SALLGVSYGIVSSSWDPLREGSFLGWTEAQNNWPVFWQSLWGRSGKK 196


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