BLASTX nr result

ID: Cephaelis21_contig00020317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020317
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]          62   5e-08
ref|XP_003532033.1| PREDICTED: cyclin-D1-1-like [Glycine max]          57   2e-06
ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|2...    56   3e-06
ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]          56   3e-06

>ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/77 (42%), Positives = 44/77 (57%)
 Frame = -2

Query: 516 KIFSCYQLVKQIMVNNMSRKTPKFLPQLRVMSRISLAXXXXXXXXXXXXXXXXXXXXSCK 337
           K+  CYQL++++++NN  RK PK LPQLRV SR  +                     SCK
Sbjct: 264 KVIGCYQLMQELVINNNRRKPPKVLPQLRVTSRPIM--RSSVSSFSASSSFSPSSSLSCK 321

Query: 336 RRRLDNYLWTDDDKESS 286
           RR+L+N LW DDDK +S
Sbjct: 322 RRKLNNSLWVDDDKGNS 338


>ref|XP_003532033.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 360

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
 Frame = -2

Query: 516 KIFSCYQLVKQIMVNNMSRKTP-KFLPQLRVMSRISL-AXXXXXXXXXXXXXXXXXXXXS 343
           K+  CYQL++++++NN  RK P K LPQLRV +R  + +                    S
Sbjct: 281 KVIGCYQLMQELVINNNQRKLPTKVLPQLRVTTRTRMRSSTVSSFSSTSSSSSSTSFSLS 340

Query: 342 CKRRRLDNYLWTDDDKESS 286
           CKRR+L+N LW DD+K +S
Sbjct: 341 CKRRKLNNRLWVDDEKGNS 359


>ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera]
           gi|296086502|emb|CBI32091.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/74 (43%), Positives = 39/74 (52%)
 Frame = -2

Query: 516 KIFSCYQLVKQIMVNNMSRKTPKFLPQLRVMSRISLAXXXXXXXXXXXXXXXXXXXXSCK 337
           KI SCYQL+++I V+N  RK PK LPQLRV  R  +                       K
Sbjct: 256 KIISCYQLMQEITVDNNRRKPPKLLPQLRVTIRARVRSSGSSSSSSSSSY---------K 306

Query: 336 RRRLDNYLWTDDDK 295
           RR+L+N LW DDDK
Sbjct: 307 RRKLNNCLWVDDDK 320


>ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = -2

Query: 516 KIFSCYQLVKQIMVNNMSRKTPKFLPQLRV-MSRISLAXXXXXXXXXXXXXXXXXXXXSC 340
           KI  CYQL+++++++N  RK PK LPQLRV +SR  +                     SC
Sbjct: 263 KIIGCYQLMQELVIDNNQRKPPKVLPQLRVTISRPIM--RSSVSSFLASSSSPSSSSLSC 320

Query: 339 KRRRLDNYLWTDDDKESS 286
           +RR+L+N LW DDDK +S
Sbjct: 321 RRRKLNNSLWVDDDKGNS 338


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