BLASTX nr result
ID: Cephaelis21_contig00020305
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00020305
(1093 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containi... 139 5e-39
emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera] 139 5e-39
ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containi... 129 8e-37
ref|XP_003634853.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 127 2e-35
ref|NP_564786.1| pentatricopeptide repeat-containing protein [Ar... 110 4e-30
>ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Vitis vinifera]
Length = 396
Score = 139 bits (350), Expect(2) = 5e-39
Identities = 100/241 (41%), Positives = 140/241 (58%), Gaps = 9/241 (3%)
Frame = +3
Query: 282 ILDIYRAASLMPESHLDRVGYRKVISKLKDLNYFNGIRSFLEE--SRPDVKSEFSISHFV 455
IL+I RAA+L PESHLDRV + ISKL D +F+ IR FL+E +RPD+++E +SH +
Sbjct: 52 ILEICRAAALTPESHLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAI 111
Query: 456 ILYGQAGMHSEKFDRMHQIGLKFEGMHQIGFG*NGKLKTLDALLLSCILAGDYMGMKWAY 635
+L+GQAGM ++ FE MHQ+G + +++L+ALL SCILA +Y +
Sbjct: 112 VLFGQAGM-------LNDAVRTFEQMHQLGV--DRTVRSLNALLFSCILAKNYKEANRIF 162
Query: 636 I*FPKIRYCSGFRYL**SD*GVMRV---G*FTSFVFSILSEMDRKGVKPIATSCWVDDGG 806
+ FPK G S V++ +S +SIL+EM RKGVKP ATS + G
Sbjct: 163 LEFPK---TYGIELNLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAG 219
Query: 807 VLGGAEMG*CWGSAGDDGRA*LI----R*SPGLSTYKIRI*SLCKLKRSKEAKALFEGIM 974
+ D G+ + + PG+STY IRI SLCKLK+S EAKAL +GI+
Sbjct: 220 FYNEEKY-------EDVGKVLKMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGIL 272
Query: 975 S 977
+
Sbjct: 273 A 273
Score = 49.3 bits (116), Expect(2) = 5e-39
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +2
Query: 125 AFLSRLRSSALFQIHWC-LLTSILNPDSKLPLTREEKPRTALSLLRTEKNPER 280
AFLSRLR H C +SIL+PDS PL+ +EK R ALSLL++E++P+R
Sbjct: 2 AFLSRLRP---ISSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQR 51
Score = 70.1 bits (170), Expect = 9e-10
Identities = 62/186 (33%), Positives = 95/186 (51%), Gaps = 9/186 (4%)
Frame = +1
Query: 538 KLGLDRTVN*RHSTL-CCFLAF*LGIIWE*SGLIYNFQK-FGIVPDLDTYDEVIKGLCES 711
+LG+DRTV ++ L C LA E + + F K +GI +LD+Y+ V+K ES
Sbjct: 132 QLGVDRTVRSLNALLFSCILA---KNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSES 188
Query: 712 GDSQALFFRY*VRWIEKG*SQLPLAVGLMMAGF*EEQKWDDVGEVLEMMEEHNS*D---- 879
G S + + KG + G+++AGF E+K++DVG+VL+MMEE+
Sbjct: 189 GSSSS-GYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKMMEEYKMQPGIST 247
Query: 880 ---KVLGLVLIKLGFRACASSKGARRQRLCLKELCQGN*AEYCRLWLCGFCKEEDLEEAK 1050
++ L +K A A G +R+ + N YC L + GFCKE +L+EAK
Sbjct: 248 YNIRIQSLCKLKKSSEAKALLDGILARRM------KPNSETYCHL-IHGFCKEGNLDEAK 300
Query: 1051 GLSERM 1068
L + M
Sbjct: 301 KLFKDM 306
>emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]
Length = 396
Score = 139 bits (350), Expect(2) = 5e-39
Identities = 100/241 (41%), Positives = 140/241 (58%), Gaps = 9/241 (3%)
Frame = +3
Query: 282 ILDIYRAASLMPESHLDRVGYRKVISKLKDLNYFNGIRSFLEE--SRPDVKSEFSISHFV 455
IL+I RAA+L PESHLDRV + ISKL D +F+ IR FL+E +RPD+++E +SH +
Sbjct: 52 ILEICRAAALTPESHLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAI 111
Query: 456 ILYGQAGMHSEKFDRMHQIGLKFEGMHQIGFG*NGKLKTLDALLLSCILAGDYMGMKWAY 635
+L+GQAGM ++ FE MHQ+G + +++L+ALL SCILA +Y +
Sbjct: 112 VLFGQAGM-------LNDAVRTFEQMHQLGV--DRTVRSLNALLFSCILAKNYKEANRIF 162
Query: 636 I*FPKIRYCSGFRYL**SD*GVMRV---G*FTSFVFSILSEMDRKGVKPIATSCWVDDGG 806
+ FPK G S V++ +S +SIL+EM RKGVKP ATS + G
Sbjct: 163 LEFPK---TYGIELNLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAG 219
Query: 807 VLGGAEMG*CWGSAGDDGRA*LI----R*SPGLSTYKIRI*SLCKLKRSKEAKALFEGIM 974
+ D G+ + + PG+STY IRI SLCKLK+S EAKAL +GI+
Sbjct: 220 FYNEEKY-------EDVGKVLKMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGIL 272
Query: 975 S 977
+
Sbjct: 273 A 273
Score = 49.3 bits (116), Expect(2) = 5e-39
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +2
Query: 125 AFLSRLRSSALFQIHWC-LLTSILNPDSKLPLTREEKPRTALSLLRTEKNPER 280
AFLSRLR H C +SIL+PDS PL+ +EK R ALSLL++E++P+R
Sbjct: 2 AFLSRLRP---ISSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQR 51
Score = 70.1 bits (170), Expect = 9e-10
Identities = 62/186 (33%), Positives = 95/186 (51%), Gaps = 9/186 (4%)
Frame = +1
Query: 538 KLGLDRTVN*RHSTL-CCFLAF*LGIIWE*SGLIYNFQK-FGIVPDLDTYDEVIKGLCES 711
+LG+DRTV ++ L C LA E + + F K +GI +LD+Y+ V+K ES
Sbjct: 132 QLGVDRTVRSLNALLFSCILA---KNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSES 188
Query: 712 GDSQALFFRY*VRWIEKG*SQLPLAVGLMMAGF*EEQKWDDVGEVLEMMEEHNS*D---- 879
G S + + KG + G+++AGF E+K++DVG+VL+MMEE+
Sbjct: 189 GSSSS-GYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKMMEEYKMQPGIST 247
Query: 880 ---KVLGLVLIKLGFRACASSKGARRQRLCLKELCQGN*AEYCRLWLCGFCKEEDLEEAK 1050
++ L +K A A G +R+ + N YC L + GFCKE +L+EAK
Sbjct: 248 YNIRIQSLCKLKKSSEAKALLDGILARRM------KPNSETYCHL-IHGFCKEGNLDEAK 300
Query: 1051 GLSERM 1068
L + M
Sbjct: 301 KLFKDM 306
>ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449471723|ref|XP_004153390.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449530564|ref|XP_004172264.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
Length = 405
Score = 129 bits (325), Expect(2) = 8e-37
Identities = 103/257 (40%), Positives = 132/257 (51%), Gaps = 25/257 (9%)
Frame = +3
Query: 282 ILDIYRAASLMPESHLDRVGYRKVISKLKDLNYFNGIRSFLEE--SRPDVKSEFSISHFV 455
I+DI RAASL PE HLDR+ + ISKL +F+GIR FLEE SRPD+K+E H +
Sbjct: 61 IIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAI 120
Query: 456 ILYGQAGMHSEKFDRMHQIGLKFEGMHQIGFG*NGKLKTLDALLLSCILAGDYMGMKWAY 635
+LYGQA M QI G +KTL+ALL +C LA DY +K Y
Sbjct: 121 VLYGQANMLDHAIRTFKQID---------ELGVRHSVKTLNALLFACNLAKDYKELKRVY 171
Query: 636 I*FPKI-----------RYCSGFRYL**SD*GVMRVG*FTSFVFSILSEMDRKGVKPIAT 782
+ FPKI R F S+ G +S V SI++EMDRK VKP AT
Sbjct: 172 MEFPKIYGIEPDIDTYNRVIKAF-----SESG------SSSSVSSIVAEMDRKDVKPNAT 220
Query: 783 S-------CWVDD-----GGVLGGAEMG*CWGSAGDDGRA*LIR*SPGLSTYKIRI*SLC 926
+ C++++ VL E +G G++TY RI SLC
Sbjct: 221 TFANWLAGCYMEEKFEDVEKVLNLMEK---YGV------------RRGVATYNARIRSLC 265
Query: 927 KLKRSKEAKALFEGIMS 977
KLKRS EAKALF+G++S
Sbjct: 266 KLKRSTEAKALFDGMLS 282
Score = 51.6 bits (122), Expect(2) = 8e-37
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 7/59 (11%)
Frame = +2
Query: 125 AFLSRLRSS-------ALFQIHWCLLTSILNPDSKLPLTREEKPRTALSLLRTEKNPER 280
A L RLRS+ +++H+ L++IL+PDS PL+ ++K R ALSLL+TE+NPER
Sbjct: 2 ALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPER 60
Score = 57.8 bits (138), Expect = 5e-06
Identities = 50/154 (32%), Positives = 69/154 (44%), Gaps = 15/154 (9%)
Frame = +1
Query: 652 FGIVPDLDTYDEVIKGLCESGDSQALFFRY*VRWIEKG*SQLPLAVGLMMAGF*EEQKWD 831
+GI PD+DTY+ VIK ESG S ++ K +AG E+K++
Sbjct: 178 YGIEPDIDTYNRVIKAFSESGSSSSV-SSIVAEMDRKDVKPNATTFANWLAGCYMEEKFE 236
Query: 832 DVGEVLEMMEEHNS*DKVLGLVLIKLGFRACASSKGARRQRLC-------LKELCQG--- 981
DV +VL +ME K G R ++ AR + LC K L G
Sbjct: 237 DVEKVLNLME--------------KYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLS 282
Query: 982 -----N*AEYCRLWLCGFCKEEDLEEAKGLSERM 1068
N YC L + GFCKE +L+EAK + +RM
Sbjct: 283 RGMDPNSVTYCEL-IHGFCKEGNLDEAKSIFKRM 315
>ref|XP_003634853.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g61870, mitochondrial-like [Vitis vinifera]
Length = 336
Score = 127 bits (319), Expect(2) = 2e-35
Identities = 99/249 (39%), Positives = 135/249 (54%), Gaps = 17/249 (6%)
Frame = +3
Query: 282 ILDIYRAASLMPESHLDRVGYRKVISKLKDLNYFNGIRSFLEE--SRPDVKSEFSISHFV 455
IL+I RAA+L PESHLDRV + ISKL D +F+ IR FL+E +RPD+++E +SH +
Sbjct: 52 ILEICRAAALTPESHLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAI 111
Query: 456 ILYGQAGMHSEKFDRMHQIGLKFEGMHQIGFG*NGKLKTLDALLLSCILAGDYMGMKWAY 635
+L+GQAGM ++ FE MHQ+G + +++L+ALL SCILA +Y +
Sbjct: 112 VLFGQAGM-------LNDAVRTFEQMHQLGV--DRTVRSLNALLFSCILAKNYKEANRIF 162
Query: 636 I*FPKIRYCSGFRYL**SD*GVMRV---G*FTSFVFSILSEMDRKGVKPIATSCWV---- 794
+ FPK G S V++ +S +SIL+EM RKGVKP ATS +
Sbjct: 163 LEFPK---TYGIELNLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAG 219
Query: 795 --------DDGGVLGGAEMG*CWGSAGDDGRA*LIR*SPGLSTYKIRI*SLCKLKRSKEA 950
D G VL E PG+STY IR SLCKLK S E
Sbjct: 220 FYNEEKYEDVGXVLKMMEE---------------YXMQPGISTYNIRXQSLCKLKXSSE- 263
Query: 951 KALFEGIMS 977
+AL +GI++
Sbjct: 264 RALLDGILA 272
Score = 48.9 bits (115), Expect(2) = 2e-35
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +2
Query: 125 AFLSRLRSSALFQIHWC-LLTSILNPDSKLPLTREEKPRTALSLLRTEKNPER 280
AFLSRLR H C +SIL+PDS PL+ +EK R ALSLL++E++P+R
Sbjct: 2 AFLSRLRP---IYSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQR 51
>ref|NP_564786.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806489|sp|Q8LE47.2|PPR87_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g61870, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8
[Arabidopsis thaliana] gi|3367521|gb|AAC28506.1| Similar
to gb|U08285 membrane-associated salt-inducible protein
from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
come from this gene [Arabidopsis thaliana]
gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis
thaliana] gi|32815835|gb|AAP88326.1| At1g61870
[Arabidopsis thaliana] gi|332195777|gb|AEE33898.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 408
Score = 110 bits (275), Expect(2) = 4e-30
Identities = 84/243 (34%), Positives = 126/243 (51%), Gaps = 6/243 (2%)
Frame = +3
Query: 267 KTQNGILDIYRAASLMPESHLDRVGYRKVISKLKDLNYFNGIRSFLE---ESRPDVKSEF 437
K + IL+I RAASL P+ +DR+ + + L + +F+ + + L+ E+RPD+KSE
Sbjct: 58 KDPDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSER 117
Query: 438 SISHFVILYGQAGMHSEKFDRMHQIGLKFEGMHQIGFG*NGKLKTLDALLLSCILAGDYM 617
+H ++LY QA M R+ + KFE + K+L+ALL +C++A DY
Sbjct: 118 FAAHAIVLYAQANMLDHSL-RVFRDLEKFEISRTV--------KSLNALLFACLVAKDYK 168
Query: 618 GMKWAYI*FPKIRYCSGFRYL**SD*GVMRVG*FTSFVFSILSEMDRKGVKPIATSCWVD 797
K YI PK+ V S +SI++EM+RKG+KP ++S +
Sbjct: 169 EAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLM 228
Query: 798 DGGVLG---GAEMG*CWGSAGDDGRA*LIR*SPGLSTYKIRI*SLCKLKRSKEAKALFEG 968
G E+G D G + G+STY IRI SLCK K+SKEAKAL +G
Sbjct: 229 ISGFYAEDKSDEVGKVLAMMKDRGV------NIGVSTYNIRIQSLCKRKKSKEAKALLDG 282
Query: 969 IMS 977
++S
Sbjct: 283 MLS 285
Score = 48.1 bits (113), Expect(2) = 4e-30
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 9/61 (14%)
Frame = +2
Query: 125 AFLSRLRSSALFQIHW---------CLLTSILNPDSKLPLTREEKPRTALSLLRTEKNPE 277
A LSR+RSS H ++IL+PDSK PLT +EK + ALSLL++EK+P+
Sbjct: 2 ALLSRIRSSTSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPD 61
Query: 278 R 280
R
Sbjct: 62 R 62
Score = 65.1 bits (157), Expect = 3e-08
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Frame = +1
Query: 652 FGIVPDLDTYDEVIKGLCESGDSQALFFRY*VRWIEKG*SQLPLAVGLMMAGF*EEQKWD 831
+GI PDL+TY+ +IK CESG S + + KG + GLM++GF E K D
Sbjct: 181 YGIEPDLETYNRMIKVFCESG-SASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSD 239
Query: 832 DVGEVLEMMEEHNS*DKVLGLVLIKLGFRACASSKGARRQRLCLKELCQG----N*AEYC 999
+VG+VL MM++ +G+ + ++ K ++ + L + N Y
Sbjct: 240 EVGKVLAMMKDRG---VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYS 296
Query: 1000 RLWLCGFCKEEDLEEAKGLSERM 1068
L + GFC E+D EEAK L + M
Sbjct: 297 HL-IHGFCNEDDFEEAKKLFKIM 318