BLASTX nr result

ID: Cephaelis21_contig00020239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020239
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB28472.1| polyprotein [Ananas comosus]                            69   3e-10
ref|XP_002330315.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]                60   1e-07
gb|AAU43957.1| putative polyprotein [Oryza sativa Japonica Group]      60   1e-07
emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group]         60   1e-07

>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/97 (30%), Positives = 55/97 (56%)
 Frame = +1

Query: 7   VTLIDGRKIVSMEKCPGADWDIQGHKFKFNIRIMDLGEWGMILGIDWM*HYSPIMFDFQA 186
           VT+ DG K++S   C    W +QG +FK N+ ++ L    M+LG+ W+    PI++DF  
Sbjct: 56  VTVADGNKLISSSTCRAFKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLGPILWDFSK 115

Query: 187 FNISLMQNGEEVILQGSIKNPIIKLVRGTDVAELRQD 297
             +     G++++L+GS   P +K++ G  + ++  D
Sbjct: 116 LRMEFQFQGQKIVLRGS-SGPSLKIIEGKQLKKMVLD 151


>ref|XP_002330315.1| predicted protein [Populus trichocarpa] gi|222871350|gb|EEF08481.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/75 (34%), Positives = 48/75 (64%)
 Frame = +1

Query: 7   VTLIDGRKIVSMEKCPGADWDIQGHKFKFNIRIMDLGEWGMILGIDWM*HYSPIMFDFQA 186
           VT+ +G  ++   + PG  W +QG++FK N+R++ L    ++LG+DW+  YSP++FDF  
Sbjct: 451 VTVANGTVMLCEMQSPGFTWFMQGYEFKANLRVLKLDRHDIMLGVDWLKQYSPVLFDFIK 510

Query: 187 FNISLMQNGEEVILQ 231
             +SL ++   + L+
Sbjct: 511 LRLSLKKSDRMIELK 525


>emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]
          Length = 1265

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/79 (32%), Positives = 47/79 (59%)
 Frame = +1

Query: 4   KVTLIDGRKIVSMEKCPGADWDIQGHKFKFNIRIMDLGEWGMILGIDWM*HYSPIMFDFQ 183
           +V + +G  +    + P A W++QGH+F  N +++ L  + MILG+DW+  YSP+  ++Q
Sbjct: 488 QVKVANGTVLYCTSELPAAKWEVQGHQFSTNFKLLPLDNYDMILGMDWLEKYSPMDINWQ 547

Query: 184 AFNISLMQNGEEVILQGSI 240
           A  I    + + V L+G +
Sbjct: 548 AKTIQFCLHDKSVELKGVV 566


>gb|AAU43957.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1263

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/80 (35%), Positives = 48/80 (60%)
 Frame = +1

Query: 7   VTLIDGRKIVSMEKCPGADWDIQGHKFKFNIRIMDLGEWGMILGIDWM*HYSPIMFDFQA 186
           V + +G+ +   ++ P A+W + G KF    +++ LG +  ILG+DW+  YSP+  D+Q 
Sbjct: 512 VKVANGQVLHCQKEMPSAEWFVSGQKFLTTFKVVALGGYDAILGMDWLTKYSPMHIDWQL 571

Query: 187 FNISLMQNGEEVILQGSIKN 246
            +I L+  G EV+L+G   N
Sbjct: 572 KSIHLIVMGHEVLLRGVQSN 591


>emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group]
          Length = 1575

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/79 (32%), Positives = 47/79 (59%)
 Frame = +1

Query: 4   KVTLIDGRKIVSMEKCPGADWDIQGHKFKFNIRIMDLGEWGMILGIDWM*HYSPIMFDFQ 183
           +V + +G  +    + P A W++QGH+F  N +++ L  + MILG+DW+  YSP+  ++Q
Sbjct: 539 QVKVANGTVLYCTSELPAAKWEVQGHQFSTNFKLLPLDNYDMILGMDWLEKYSPMDINWQ 598

Query: 184 AFNISLMQNGEEVILQGSI 240
           A  I    + + V L+G +
Sbjct: 599 AKTIQFCLHDKSVELKGVV 617


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