BLASTX nr result

ID: Cephaelis21_contig00020201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020201
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA20410.1| A-type cyclin [Catharanthus roseus]                   463   e-128
emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum]             449   e-124
ref|XP_002285074.2| PREDICTED: putative cyclin-A3-1-like isoform...   422   e-116
dbj|BAA20412.1| A-type cyclin [Catharanthus roseus]                   419   e-115
ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|2...   417   e-114

>dbj|BAA20410.1| A-type cyclin [Catharanthus roseus]
          Length = 372

 Score =  463 bits (1192), Expect = e-128
 Identities = 234/336 (69%), Positives = 268/336 (79%), Gaps = 9/336 (2%)
 Frame = -1

Query: 983  MLDKENCGIVTRLAKRRAVEAMKAASQQRPSKKRVVLGELKNLSANVSE---------PK 831
            M DKENC  VTRLAK+RAVEAM A+ QQRPSKKRVVLGELKNLS+N+S          P+
Sbjct: 1    MADKENCIRVTRLAKKRAVEAMAASEQQRPSKKRVVLGELKNLSSNISSIQTYDFSSGPQ 60

Query: 830  MEQRCGXXXXXXXXXXXXXXXXXXEDPAIDIDAKSDDPQMCKDYVSDIYAYLRKMEMEEN 651
             +Q+                    E+  ID+ ++SDDPQMC  YVSDIY YL KMEME  
Sbjct: 61   KQQKNKNKRKAKESLGFEVKEKKVEEAGIDVFSQSDDPQMCGAYVSDIYEYLHKMEMETK 120

Query: 650  RRPLPDYLEKIQKDVTANMRGILVDWLVEVAEEYKLLSDTLYLTVSYIDRFLSRNTIGRQ 471
            RRPLPDYL+K+QKDVTANMRG+L+DWLVEVAEEYKLL DTLYLTVSYIDRFLS N + RQ
Sbjct: 121  RRPLPDYLDKVQKDVTANMRGVLIDWLVEVAEEYKLLPDTLYLTVSYIDRFLSMNALSRQ 180

Query: 470  RLQLLGVSSMLIASKYEELNPPHVEDFCYITDNTYTKQELVKMEFDVLSFLKYEIGNPTS 291
            +LQLLGVSSMLIASKYEE++PPHVEDFCYITDNTY K+E+VKME DVL FLK+E+GNPT 
Sbjct: 181  KLQLLGVSSMLIASKYEEISPPHVEDFCYITDNTYKKEEVVKMEADVLKFLKFEMGNPTI 240

Query: 290  KVFLRRFMRVARENYDNPNLQLEFLGYYLAELSLLDYSCVKFLPSLVAAAVVFLSRFTLQ 111
            K FLRR  RV ++   NPNLQ EFLGYYLAELSLLDY CVKFLPSL+A++V+FLSRFTLQ
Sbjct: 241  KTFLRRLTRVVQDGDKNPNLQFEFLGYYLAELSLLDYGCVKFLPSLIASSVIFLSRFTLQ 300

Query: 110  PEHNPWNAALHHYSGYKAADLKECVLIMHDLQLRRR 3
            P+ +PWN+ L H SGYK ADLKECVLI+HDLQL +R
Sbjct: 301  PKVHPWNSLLQHNSGYKPADLKECVLIIHDLQLSKR 336


>emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum]
          Length = 384

 Score =  449 bits (1156), Expect = e-124
 Identities = 232/336 (69%), Positives = 265/336 (78%), Gaps = 9/336 (2%)
 Frame = -1

Query: 983  MLDKENCGIVTRLAKRRAVEAMKAASQQRPSKKRVVLGELKNLS-ANVS-------EPKM 828
            M D ENCG VTRLAK+RA EAM +  QQ PSKKRVVLGE++N S   VS       EPK 
Sbjct: 10   MADLENCGRVTRLAKKRAAEAMASHQQQHPSKKRVVLGEIQNFSNLGVSQIKGLNTEPKK 69

Query: 827  EQRCGXXXXXXXXXXXXXXXXXXEDPAID-IDAKSDDPQMCKDYVSDIYAYLRKMEMEEN 651
            + +                    E+  +D +DA  DDPQMC  YVSDIY YLRKME+EE 
Sbjct: 70   QPKSKQQQSKRKLKRAVTSKIDKEELNVDNVDANYDDPQMCSAYVSDIYDYLRKMEIEEK 129

Query: 650  RRPLPDYLEKIQKDVTANMRGILVDWLVEVAEEYKLLSDTLYLTVSYIDRFLSRNTIGRQ 471
            RRPLPDYLEK+QKD++ NMRG+LVDWLVEVAEEYKLLSDTLYL VSYIDRFLS N I RQ
Sbjct: 130  RRPLPDYLEKVQKDLSPNMRGVLVDWLVEVAEEYKLLSDTLYLAVSYIDRFLSTNVITRQ 189

Query: 470  RLQLLGVSSMLIASKYEELNPPHVEDFCYITDNTYTKQELVKMEFDVLSFLKYEIGNPTS 291
            +LQLLGVSSMLI++KYEE++PPHVEDFCYITDNTYTK+E+VKME DVL  L +E+GNPT 
Sbjct: 190  KLQLLGVSSMLISAKYEEISPPHVEDFCYITDNTYTKEEVVKMEADVLKTLNFEMGNPTV 249

Query: 290  KVFLRRFMRVARENYDNPNLQLEFLGYYLAELSLLDYSCVKFLPSLVAAAVVFLSRFTLQ 111
            K FLRRF  VA+E+Y  PNLQLEFLGYYLAELS+LDYSCVK++PSL+AAAVVFLSRFTLQ
Sbjct: 250  KTFLRRFTGVAQEDYKTPNLQLEFLGYYLAELSILDYSCVKYVPSLLAAAVVFLSRFTLQ 309

Query: 110  PEHNPWNAALHHYSGYKAADLKECVLIMHDLQLRRR 3
            P  +PW+ AL  YSGYKAADLKEC+LI+HDLQL RR
Sbjct: 310  PNTHPWSLALQQYSGYKAADLKECILILHDLQLSRR 345


>ref|XP_002285074.2| PREDICTED: putative cyclin-A3-1-like isoform 1 [Vitis vinifera]
           gi|302142243|emb|CBI19446.3| unnamed protein product
           [Vitis vinifera]
          Length = 365

 Score =  422 bits (1086), Expect = e-116
 Identities = 216/329 (65%), Positives = 251/329 (76%), Gaps = 2/329 (0%)
 Frame = -1

Query: 983 MLDKENCGIVTRLAKRRAVEAMKAAS--QQRPSKKRVVLGELKNLSANVSEPKMEQRCGX 810
           M D+EN   +TR AK+RA  AM A+   Q  P+KKRVVLGEL NLS   + P      G 
Sbjct: 1   MADQENSVRITRAAKKRAAAAMAASDSLQLPPNKKRVVLGELPNLSNVAATPAAVPASGA 60

Query: 809 XXXXXXXXXXXXXXXXXEDPAIDIDAKSDDPQMCKDYVSDIYAYLRKMEMEENRRPLPDY 630
                              P  D+ AKSDDPQMC  Y +DIY YL  MEME  RRPL DY
Sbjct: 61  QKQKFRPKKKEKVKAAVVAP--DVGAKSDDPQMCGPYATDIYEYLHSMEMEPKRRPLHDY 118

Query: 629 LEKIQKDVTANMRGILVDWLVEVAEEYKLLSDTLYLTVSYIDRFLSRNTIGRQRLQLLGV 450
           +EK+QKDV+ NMRGILVDWLVEVAEEYKL SDTLYLT+SYIDRFLS   + RQRLQLLGV
Sbjct: 119 IEKVQKDVSHNMRGILVDWLVEVAEEYKLASDTLYLTISYIDRFLSSKALNRQRLQLLGV 178

Query: 449 SSMLIASKYEELNPPHVEDFCYITDNTYTKQELVKMEFDVLSFLKYEIGNPTSKVFLRRF 270
           SSMLIA+KYEE++PPHVEDFCYITDNTYTK+E+VKME D+L  L +E+GNPT K FLRRF
Sbjct: 179 SSMLIAAKYEEISPPHVEDFCYITDNTYTKEEVVKMEADILKSLNFEMGNPTIKTFLRRF 238

Query: 269 MRVARENYDNPNLQLEFLGYYLAELSLLDYSCVKFLPSLVAAAVVFLSRFTLQPEHNPWN 90
            R+A+ENY  PNLQLEFL YYLAELSLLDY CVKFLPS+VAA+V+FLSRFTL+P+ +PW 
Sbjct: 239 TRIAQENYKTPNLQLEFLVYYLAELSLLDYGCVKFLPSMVAASVIFLSRFTLRPKTHPWC 298

Query: 89  AALHHYSGYKAADLKECVLIMHDLQLRRR 3
           ++L H+SGYK ++LKECVLI+HDLQL RR
Sbjct: 299 SSLQHHSGYKPSELKECVLIIHDLQLSRR 327


>dbj|BAA20412.1| A-type cyclin [Catharanthus roseus]
          Length = 306

 Score =  419 bits (1076), Expect = e-115
 Identities = 212/306 (69%), Positives = 243/306 (79%), Gaps = 9/306 (2%)
 Frame = -1

Query: 983 MLDKENCGIVTRLAKRRAVEAMKAASQQRPSKKRVVLGELKNLSANVSE---------PK 831
           M DKENC  VTRLAK+RAVEAM A+ QQRPSKKRVVLGELKNLS+N+S          P+
Sbjct: 1   MADKENCIRVTRLAKKRAVEAMAASEQQRPSKKRVVLGELKNLSSNISSIQTYDFSSGPQ 60

Query: 830 MEQRCGXXXXXXXXXXXXXXXXXXEDPAIDIDAKSDDPQMCKDYVSDIYAYLRKMEMEEN 651
            +Q+                    E+  ID+ ++SDDPQMC  YVSDIY YL KMEME  
Sbjct: 61  KQQKNKNKRKAKESLGFEVKEKKVEEAGIDVFSQSDDPQMCGAYVSDIYEYLHKMEMETK 120

Query: 650 RRPLPDYLEKIQKDVTANMRGILVDWLVEVAEEYKLLSDTLYLTVSYIDRFLSRNTIGRQ 471
           RRPLPDYL+K+QKDVTANMRG+L+DWLVEVAEEYKLL DTLYLTVSYIDRFLS N + RQ
Sbjct: 121 RRPLPDYLDKVQKDVTANMRGVLIDWLVEVAEEYKLLPDTLYLTVSYIDRFLSMNALSRQ 180

Query: 470 RLQLLGVSSMLIASKYEELNPPHVEDFCYITDNTYTKQELVKMEFDVLSFLKYEIGNPTS 291
           +LQLLGVSSMLIASKYEE++PPHVEDFCYITDNTY K+E+VKME DVL FLK+E+GNPT 
Sbjct: 181 KLQLLGVSSMLIASKYEEISPPHVEDFCYITDNTYKKEEVVKMEADVLKFLKFEMGNPTI 240

Query: 290 KVFLRRFMRVARENYDNPNLQLEFLGYYLAELSLLDYSCVKFLPSLVAAAVVFLSRFTLQ 111
           K FLRR  RV ++   NPNLQ EFLGYYLAELSLLDY CVKFLPSL+A++V+FLSRFTLQ
Sbjct: 241 KTFLRRLTRVVQDGDKNPNLQFEFLGYYLAELSLLDYGCVKFLPSLIASSVIFLSRFTLQ 300

Query: 110 PEHNPW 93
           P+ +PW
Sbjct: 301 PKVHPW 306


>ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|222842883|gb|EEE80430.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  417 bits (1072), Expect = e-114
 Identities = 212/328 (64%), Positives = 256/328 (78%), Gaps = 1/328 (0%)
 Frame = -1

Query: 983 MLDKENCGIVTRLAKRRAVEAMKAASQQRPSKKRVVLGELKNLS-ANVSEPKMEQRCGXX 807
           M ++ENC  VTR AK+RA  A+ +   Q  +KKRVVLGEL NLS A VS  + +++    
Sbjct: 1   MAEQENCTRVTRAAKKRAA-ALASTEDQPLNKKRVVLGELPNLSNAIVSSNEPQKQKAKA 59

Query: 806 XXXXXXXXXXXXXXXXEDPAIDIDAKSDDPQMCKDYVSDIYAYLRKMEMEENRRPLPDYL 627
                           ++   D+D   +DPQMC  Y SDIY YL KME++  RRPLPDY+
Sbjct: 60  KPKARKGASTKKEGVLKE---DVDGNPEDPQMCAPYASDIYEYLHKMEVDPKRRPLPDYI 116

Query: 626 EKIQKDVTANMRGILVDWLVEVAEEYKLLSDTLYLTVSYIDRFLSRNTIGRQRLQLLGVS 447
           EK+QKDV+ NMRGILVDWLVEVAEEYKL+S+TLYLTVSY+DRFLS N + RQRLQLLGVS
Sbjct: 117 EKVQKDVSPNMRGILVDWLVEVAEEYKLVSETLYLTVSYVDRFLSFNVLSRQRLQLLGVS 176

Query: 446 SMLIASKYEELNPPHVEDFCYITDNTYTKQELVKMEFDVLSFLKYEIGNPTSKVFLRRFM 267
           SML+ASKYEE+NPPHVEDFCYITDNTYTK+E+VKME D+L  LK+E+GNPT K FLRRF 
Sbjct: 177 SMLLASKYEEINPPHVEDFCYITDNTYTKEEVVKMEADILKSLKFEMGNPTIKTFLRRFT 236

Query: 266 RVARENYDNPNLQLEFLGYYLAELSLLDYSCVKFLPSLVAAAVVFLSRFTLQPEHNPWNA 87
           RVA E+Y   NLQLEFLG+YLAELSLLDY+CVKFLPSLVAA+V+FL+RF ++P+ NPW++
Sbjct: 237 RVALEDYKTSNLQLEFLGFYLAELSLLDYNCVKFLPSLVAASVIFLTRFLMRPKTNPWSS 296

Query: 86  ALHHYSGYKAADLKECVLIMHDLQLRRR 3
            L  Y+GYKAADL+ECVLI+HDL L RR
Sbjct: 297 TLQQYTGYKAADLRECVLIIHDLYLSRR 324


Top