BLASTX nr result

ID: Cephaelis21_contig00020192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020192
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626258.1| Histone H2A [Medicago truncatula] gi|1243600...   163   2e-38
ref|XP_004144786.1| PREDICTED: probable histone H2A.5-like [Cucu...   163   3e-38
ref|XP_002318994.1| histone 2 [Populus trichocarpa] gi|222857370...   163   3e-38
ref|XP_002330210.1| histone 2 [Populus trichocarpa] gi|222871666...   161   9e-38
gb|ABK94359.1| unknown [Populus trichocarpa]                          161   9e-38

>ref|XP_003626258.1| Histone H2A [Medicago truncatula] gi|124360019|gb|ABN08035.1|
           Histone H2A; Histone-fold [Medicago truncatula]
           gi|355501273|gb|AES82476.1| Histone H2A [Medicago
           truncatula]
          Length = 144

 Score =  163 bits (413), Expect = 2e-38
 Identities = 83/106 (78%), Positives = 88/106 (83%)
 Frame = -3

Query: 536 VTKSIKAGLQFPVGRIARFMKRGRYSQRTGVGAPIYMXXXXXXXXXXXXXXAGNAARDNK 357
           V+KS KAGLQFPVGRIARFMK+GRYSQR G GAPIY+              AGNAARDNK
Sbjct: 27  VSKSSKAGLQFPVGRIARFMKKGRYSQRVGTGAPIYLAAVLEYLAAEVLELAGNAARDNK 86

Query: 356 KNRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPILLPKKT 219
           KNRINPRHV LAVRND+ELGKLLQGVTIASGGVLPNINP+LLPKKT
Sbjct: 87  KNRINPRHVCLAVRNDDELGKLLQGVTIASGGVLPNINPVLLPKKT 132


>ref|XP_004144786.1| PREDICTED: probable histone H2A.5-like [Cucumis sativus]
           gi|449521036|ref|XP_004167537.1| PREDICTED: probable
           histone H2A.5-like [Cucumis sativus]
          Length = 141

 Score =  163 bits (412), Expect = 3e-38
 Identities = 81/106 (76%), Positives = 89/106 (83%)
 Frame = -3

Query: 536 VTKSIKAGLQFPVGRIARFMKRGRYSQRTGVGAPIYMXXXXXXXXXXXXXXAGNAARDNK 357
           V+KS+KAGLQFPVGRI R++K+GRY+QRT  GAPIY+              AGNAARDNK
Sbjct: 18  VSKSVKAGLQFPVGRIGRYLKKGRYAQRTAAGAPIYLAAVLEYLAAEVLELAGNAARDNK 77

Query: 356 KNRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPILLPKKT 219
           KNRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINP+LLPKKT
Sbjct: 78  KNRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLPKKT 123


>ref|XP_002318994.1| histone 2 [Populus trichocarpa] gi|222857370|gb|EEE94917.1| histone
           2 [Populus trichocarpa]
          Length = 141

 Score =  163 bits (412), Expect = 3e-38
 Identities = 82/106 (77%), Positives = 89/106 (83%)
 Frame = -3

Query: 536 VTKSIKAGLQFPVGRIARFMKRGRYSQRTGVGAPIYMXXXXXXXXXXXXXXAGNAARDNK 357
           V+KS KAGLQFPVGRIARF+K+GRY+QR G GAPIYM              AGNAARDNK
Sbjct: 19  VSKSTKAGLQFPVGRIARFLKKGRYAQRVGSGAPIYMAAVLEYLAAEVLELAGNAARDNK 78

Query: 356 KNRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPILLPKKT 219
           KNRINPRHVLLA+RNDEELGKLLQGVTIASGGVLPNINP+LLPKK+
Sbjct: 79  KNRINPRHVLLAIRNDEELGKLLQGVTIASGGVLPNINPVLLPKKS 124


>ref|XP_002330210.1| histone 2 [Populus trichocarpa] gi|222871666|gb|EEF08797.1| histone
           2 [Populus trichocarpa]
          Length = 141

 Score =  161 bits (408), Expect = 9e-38
 Identities = 82/106 (77%), Positives = 89/106 (83%)
 Frame = -3

Query: 536 VTKSIKAGLQFPVGRIARFMKRGRYSQRTGVGAPIYMXXXXXXXXXXXXXXAGNAARDNK 357
           V+KSIKAGLQFPVGRI+RF+K+GRY++R G GAPIYM              AGNAARDNK
Sbjct: 19  VSKSIKAGLQFPVGRISRFLKKGRYAKRLGSGAPIYMAAVLEYLAAEVLELAGNAARDNK 78

Query: 356 KNRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPILLPKKT 219
           K RINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINP+LLPKKT
Sbjct: 79  KTRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLPKKT 124


>gb|ABK94359.1| unknown [Populus trichocarpa]
          Length = 145

 Score =  161 bits (408), Expect = 9e-38
 Identities = 82/106 (77%), Positives = 89/106 (83%)
 Frame = -3

Query: 536 VTKSIKAGLQFPVGRIARFMKRGRYSQRTGVGAPIYMXXXXXXXXXXXXXXAGNAARDNK 357
           V+KSIKAGLQFPVGRI+RF+K+GRY++R G GAPIYM              AGNAARDNK
Sbjct: 23  VSKSIKAGLQFPVGRISRFLKKGRYAKRLGSGAPIYMAAVLEYLAAEVLELAGNAARDNK 82

Query: 356 KNRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPILLPKKT 219
           K RINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINP+LLPKKT
Sbjct: 83  KTRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLPKKT 128


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