BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020174
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    60   1e-10
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...    65   5e-10
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    57   2e-09
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    53   6e-07
gb|AAC28197.1| contains similarity to reverse transcriptases [Ar...    49   6e-07

>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 60.1 bits (144), Expect(2) = 1e-10
 Identities = 30/76 (39%), Positives = 48/76 (63%)
 Frame = +3

Query: 57  DI*NDILDKIVARLEGWKGLLLSMGGCLT*VKHVLSAIPIYSFASVSPPHSFLPRIERVC 236
           D   +IL ++ +RL GWKG +LS+ G LT  K VLS+IPI++ ++++ P + L   +R+ 
Sbjct: 218 DTFGEILLRVSSRLAGWKGRMLSLAGRLTLTKSVLSSIPIHTMSTIALPKATLDGFDRIS 277

Query: 237 GRFLWDSSDISQKTKL 284
             F+W SS   +K  L
Sbjct: 278 KSFVWGSSTEKKKQHL 293



 Score = 30.4 bits (67), Expect(2) = 1e-10
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 271 KRRNWSSWGALSYSISENGLALRSLGVVFAAFACKLWWK-CKTKSGLWAKYI 423
           K+++  +W  +  +    GL +RS   +  A   K+ W+  + KS LWA+ I
Sbjct: 289 KKQHLLAWNKIYCTKQAGGLGIRSSRAMNTALLAKIGWRLLQDKSSLWARVI 340


>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 732

 Score = 64.7 bits (156), Expect(2) = 5e-10
 Identities = 32/76 (42%), Positives = 48/76 (63%)
 Frame = +3

Query: 57  DI*NDILDKIVARLEGWKGLLLSMGGCLT*VKHVLSAIPIYSFASVSPPHSFLPRIERVC 236
           D   DIL+K+  RL GWKG  LS+ G +T  K VLS+IP+++ ++++ P S L  +++V 
Sbjct: 288 DTFGDILEKLTTRLAGWKGRFLSLAGRVTLTKAVLSSIPVHTMSTIALPKSTLDGLDKVS 347

Query: 237 GRFLWDSSDISQKTKL 284
             FLW SS   +K  L
Sbjct: 348 RSFLWGSSVTQRKQHL 363



 Score = 23.9 bits (50), Expect(2) = 5e-10
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 262 ILAKRRNWSSWGALSYSISENGLALRSLGVVFAAFACKLWWK-CKTKSGLWAK 417
           +  ++++  SW  +    SE GL +R    +  A   K+ W+  +    LWA+
Sbjct: 356 VTQRKQHLISWKRVCKPRSEGGLGIRKAQDMNKALLSKVGWRLIQDYHSLWAR 408


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 56.6 bits (135), Expect(2) = 2e-09
 Identities = 28/72 (38%), Positives = 45/72 (62%)
 Frame = +3

Query: 69  DILDKIVARLEGWKGLLLSMGGCLT*VKHVLSAIPIYSFASVSPPHSFLPRIERVCGRFL 248
           ++L+++ ARL GWKG  LS+ G +T  K VLS+IP++  +++  P S L  ++R    FL
Sbjct: 630 EVLERVSARLAGWKGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFL 689

Query: 249 WDSSDISQKTKL 284
           W S+   +K  L
Sbjct: 690 WGSTMEKKKQHL 701



 Score = 30.0 bits (66), Expect(2) = 2e-09
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 271 KRRNWSSWGALSYSISENGLALRSLGVVFAAFACKLWWK-CKTKSGLWAKYI 423
           K+++  SW  +    +E G+ LRS   +  A   K+ W+  + K  LWA+ +
Sbjct: 697 KKQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVV 748


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 53.1 bits (126), Expect(2) = 6e-07
 Identities = 24/66 (36%), Positives = 39/66 (59%)
 Frame = +3

Query: 72  ILDKIVARLEGWKGLLLSMGGCLT*VKHVLSAIPIYSFASVSPPHSFLPRIERVCGRFLW 251
           +L+K+ + + GW+   L+M G  T +K V+S+ P+Y   S   P S +  IE+ C +FLW
Sbjct: 771 LLEKVKSAINGWQAKYLNMAGRCTLIKSVVSSFPVYGMQSSLLPVSVMNEIEKDCRKFLW 830

Query: 252 DSSDIS 269
           +  D S
Sbjct: 831 NKMDKS 836



 Score = 25.0 bits (53), Expect(2) = 6e-07
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +1

Query: 289 SWGALSYSISENGLALRSLGVVFAAFACKLWWK-CKTKSGLWAKYIE 426
           SW  +     + GL  R L     AF  KL W   K ++ LW + ++
Sbjct: 843 SWDRICSPTGKGGLGFRRLHNWNLAFMAKLGWMIIKDETKLWVRILK 889


>gb|AAC28197.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267156|emb|CAB77868.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 1077

 Score = 48.5 bits (114), Expect(2) = 6e-07
 Identities = 27/73 (36%), Positives = 36/73 (49%)
 Frame = +3

Query: 57  DI*NDILDKIVARLEGWKGLLLSMGGCLT*VKHVLSAIPIYSFASVSPPHSFLPRIERVC 236
           D+   I+D+I  R   W    LS  G LT +K VLS +P Y+ +    P S   RI+   
Sbjct: 698 DLFTAIVDRIKQRALSWSSRFLSSAGKLTMLKSVLSTMPTYTMSCFQLPLSLCKRIQSTL 757

Query: 237 GRFLWDSSDISQK 275
            RF WDS    +K
Sbjct: 758 TRFWWDSKPDQRK 770



 Score = 29.6 bits (65), Expect(2) = 6e-07
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 271 KRRNWSSWGALSYSISENGLALRSLGVVFAAFACKLWWK-CKTKSGLWAKYIEG 429
           ++ +W SW  ++ S    GL  R +     A   KL W+  +  S L AK + G
Sbjct: 769 RKMSWISWQKMTLSFKSGGLGFRDVQTFNKALLAKLSWRLLQNPSCLLAKLLLG 822