BLASTX nr result

ID: Cephaelis21_contig00020152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020152
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513950.1| ubiquitin-protein ligase, putative [Ricinus ...    58   9e-07
ref|XP_002269291.1| PREDICTED: F-box protein FBW2 isoform 1 [Vit...    57   1e-06
ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1...    56   3e-06

>ref|XP_002513950.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547036|gb|EEF48533.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 329

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 11/102 (10%)
 Frame = -2

Query: 455 DENFLK-KFPTLKLVGPHITDRYDMYGW-----XXXXXXXXXXXYLAWXXXXXXXXXXXD 294
           D NFL+ KFP LK+VGPH+ D YDM  W                Y AW           D
Sbjct: 230 DRNFLQEKFPKLKVVGPHLLDYYDMNDWGDYCSEYSDAYSDASEYFAWEIFSGDMEDYDD 289

Query: 293 EFP----GGYWANEQQIEEVEMWFYNDVEPMDAG-YDWPLSP 183
           +       G W +EQ++EE+E+ FY   E  DAG Y WPLSP
Sbjct: 290 DDDDDSYDGMWDDEQRLEELELRFYEGNE--DAGLYGWPLSP 329


>ref|XP_002269291.1| PREDICTED: F-box protein FBW2 isoform 1 [Vitis vinifera]
           gi|359496684|ref|XP_003635300.1| PREDICTED: F-box
           protein FBW2 isoform 2 [Vitis vinifera]
           gi|296085646|emb|CBI29445.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/92 (33%), Positives = 47/92 (51%)
 Frame = -2

Query: 458 LDENFLKKFPTLKLVGPHITDRYDMYGWXXXXXXXXXXXYLAWXXXXXXXXXXXDEFPGG 279
           LDE  +KKF  LK+VGP + D Y+  GW           YLAW           DE    
Sbjct: 228 LDEKLIKKFSGLKVVGPLVIDCYEGNGWDDCSAYSGSSGYLAWDFVAGEMDYYDDELYAA 287

Query: 278 YWANEQQIEEVEMWFYNDVEPMDAGYDWPLSP 183
           +   ++ ++++E+ FY+  +  +AG+DWP SP
Sbjct: 288 W--EDESMDDLELRFYDGFDADNAGFDWPQSP 317


>ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1 [Glycine max]
           gi|356508075|ref|XP_003522786.1| PREDICTED: F-box
           protein FBW2-like isoform 2 [Glycine max]
          Length = 321

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
 Frame = -2

Query: 458 LDENFLK-KFPTLKLVGPHITDRYDMYGWXXXXXXXXXXXYLAWXXXXXXXXXXXDEFPG 282
           LD  FLK KFP LK++GP + D Y+  GW           YLAW            +   
Sbjct: 228 LDHMFLKQKFPKLKVLGPFVLDTYESDGWDDFSDVSDSSEYLAWDFVAGGMEEYYVDDSD 287

Query: 281 GY---WANEQQIEEVEMWFYNDVEPMDAGYDWPLSP 183
            Y   W +E +++E++  FY  +E  DAG  WP SP
Sbjct: 288 SYDGMWDDEGRLDELQFGFYEGIE--DAGMYWPPSP 321


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