BLASTX nr result

ID: Cephaelis21_contig00020064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00020064
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548373.1| PREDICTED: zinc finger CCCH domain-containin...    84   4e-14
ref|XP_004141817.1| PREDICTED: zinc finger CCCH domain-containin...    77   4e-12
ref|XP_003627367.1| Zinc finger CCCH domain-containing protein [...    75   2e-11
ref|XP_002304233.1| predicted protein [Populus trichocarpa] gi|2...    70   8e-10
ref|XP_002272277.1| PREDICTED: zinc finger CCCH domain-containin...    68   2e-09

>ref|XP_003548373.1| PREDICTED: zinc finger CCCH domain-containing protein 62-like
           [Glycine max]
          Length = 463

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 6/275 (2%)
 Frame = +2

Query: 38  QQLYLVLLNSQEWEDETERKKILSEKHARGYVARSNRGFRVQEREMRKKLKLDRILKSED 217
           + LY +    Q+WEDE +R+KIL EKH+RG +AR +R  R+QE+E RKK+K +R+ K + 
Sbjct: 222 RNLYRLKTLRQKWEDEAKRQKILMEKHSRGSLAREDREARMQEKEKRKKIKENRVSKKDS 281

Query: 218 KRKEMPSSVNITLKNMEQSQQLPEEMLNTL--QSQNIKPKNCGELRSCNGKTSAWLEGPV 391
            R +  S+ +IT     + Q  P+E    +  +      +N G   +   +TS+ +  P 
Sbjct: 282 ARNQSQSNSHIT-----RPQYQPQETNVPINPEKPEFPSRNSGLSANIRKETSSIVHKPA 336

Query: 392 SVQMRPTRPLDANVPLERHHLGRQPLTNMNCNLPRDPPRTSICEGQTKFQKSMNSVHGAS 571
           +V                HH+  + L                  G+T F  +M++    S
Sbjct: 337 AV--------------TGHHVDSKTL------------------GRTSFTDNMHNQQAWS 364

Query: 572 HYEVTTNHNSIGGPLRAPGGWDFTSTGSNPLGSSTRRNVGDNLNLRPWSPKHIHVRGANF 751
             +   N + IG   R      + + G     S  R      L         + +  AN 
Sbjct: 365 TGD-CRNISDIGHMRRGADHSAYYNYGD----SHFREKPTVILKYHHHYHHRMPLANANH 419

Query: 752 ---IAPEKPVQGKKQQPCRYHAKGR-YYGNNCKWL 844
              + P++    K++Q CR++A+GR YYG+NCK+L
Sbjct: 420 SQQVLPDRESYDKQKQVCRHYARGRCYYGDNCKFL 454


>ref|XP_004141817.1| PREDICTED: zinc finger CCCH domain-containing protein 62-like
           [Cucumis sativus] gi|449480674|ref|XP_004155964.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           62-like [Cucumis sativus]
          Length = 498

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 77/273 (28%), Positives = 117/273 (42%), Gaps = 5/273 (1%)
 Frame = +2

Query: 38  QQLYLVLLNSQEWEDETERKKILSEKHARGYVARSNRGFRVQEREMRKKLKLDRILKSED 217
           + LY +    Q WEDE ER+K+L EKHARG +ARSNR  RV E+E RK  K +R  + E 
Sbjct: 240 RNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNREARVIEKEKRKTHKENREPRKEG 299

Query: 218 KRKEMPSSVNITLKNMEQSQQLPE-EMLNTLQSQNIKPKNCGELRSCNGKTSAWLEGPVS 394
            R   PS  N++      +  + +  +   +  Q+ +  + G LR    +T + L     
Sbjct: 300 FRNN-PSQSNLSSAGTILANSMAKLSVERNVVHQHQERPSFGNLRKATDQTKSHL----F 354

Query: 395 VQMRPTRPLDANVPLERHHLGRQPLTNMNCNLPR---DPPRTSICEGQTKFQKSMNSVHG 565
           +     R     +P +  H+    + N   + P+   +PP  +I        ++ ++   
Sbjct: 355 IDDHNNR-----LPFQHQHMVDNTIKNNYYSQPQTKANPP--AIFNIHPSIYRNNHAAAS 407

Query: 566 ASHYEVTTNHNSIGGPLRAPGGWDFTSTGSNPLGSSTRRNVGDNLNLRPWSPKHIHVRGA 745
            +     TNH S          WD+      P+         D +NL P           
Sbjct: 408 VNKVLDNTNHIS----------WDYDHHSRLPM---------DRMNLYP---------KV 439

Query: 746 NFIAPEKPVQGKKQQPCRYHAKGR-YYGNNCKW 841
           N  A E    G KQQ CRY+A G+ YY  NCK+
Sbjct: 440 NHSAQE----GYKQQQCRYYAVGKCYYRENCKF 468


>ref|XP_003627367.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355521389|gb|AET01843.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 396

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 76/276 (27%), Positives = 116/276 (42%), Gaps = 7/276 (2%)
 Frame = +2

Query: 38  QQLYLVLLNSQEWEDETERKKILSEKHARGYVARSNRGFRVQEREMRKKLKLDRILKSED 217
           + LY +    Q+WEDE +R+K+L EKH+RG VAR++R  R+QE+EMRK +K +RI K + 
Sbjct: 153 RNLYRLKTLRQKWEDEGKRQKLLMEKHSRGSVARADREARIQEKEMRKSMKENRISKKDS 212

Query: 218 KRKEMPSSVNITLKNMEQSQQLPEEMLNTLQSQNIKPKNCGELRSCNGKTSAWLEGPVSV 397
            + +  S        M +SQ  P+E         I PK   E  S +   S         
Sbjct: 213 AKNQFQSH-----STMARSQNQPQETTTVF----INPKKT-EFPSQHSALST-------- 254

Query: 398 QMRPTRPLDANVPLERHHLGRQPLTNMNCNLPRDPPRTSICEGQTKFQKSMNSVHGASHY 577
                 P   N P        QP  +    +  D  R S   G++ F    N+ +   HY
Sbjct: 255 ------PAIVNKPAAVTEQRVQPTYSRTVVMGSDQLRNS---GKSSF--IANNYYADYHY 303

Query: 578 EVTTNHNSIGGPLRAPGGWDFTSTGSNPLGSSTRRNVGDNLNLRPWS--PKHIHVRGANF 751
                      P      ++     +N   S  R+ +    +  P S    H   R  N 
Sbjct: 304 R--------DNPTSTAERYNAFIAETNRRASYQRKPLTSANHFVPRSANANHFVPRSENA 355

Query: 752 IAPEKPVQGK----KQQPCRYHAKGR-YYGNNCKWL 844
                 +  +    ++Q CR+ A+GR +YG+NCK+L
Sbjct: 356 NHMHTSISNRESYQQKQFCRHFARGRCHYGDNCKFL 391


>ref|XP_002304233.1| predicted protein [Populus trichocarpa] gi|222841665|gb|EEE79212.1|
           predicted protein [Populus trichocarpa]
          Length = 515

 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
 Frame = +2

Query: 38  QQLYLVLLNSQEWEDETERKKILSEKHARGYVARSNRGFRVQEREMRKKLKLDRILKSED 217
           + LY +    Q WEDE ER+KIL EKH RG +ARS+R  R+QE+E RK L+++R LK E+
Sbjct: 262 RNLYRMKTLRQRWEDEGERRKILLEKHLRGSLARSSRETRIQEKEGRKMLRVERALKKEE 321

Query: 218 KRKEMP-----SSVNITLKNMEQSQQL 283
             K        +S+   L  M+Q Q L
Sbjct: 322 TNKSRSHLNPRTSLTNGLSRMDQRQPL 348


>ref|XP_002272277.1| PREDICTED: zinc finger CCCH domain-containing protein 62 [Vitis
           vinifera] gi|297742965|emb|CBI35832.3| unnamed protein
           product [Vitis vinifera]
          Length = 438

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
 Frame = +2

Query: 38  QQLYLVLLNSQEWEDETERKKILSEKHARGYVARSNRGFRVQEREMRKK---LKLDRILK 208
           + LY +    Q WEDE ER+K+L EKH+RG +ARS+R  R+QE+EMRK    LK+ R  K
Sbjct: 235 RNLYRLKTLRQRWEDEGERQKVLMEKHSRGSLARSDREARIQEKEMRKNNRHLKVTR--K 292

Query: 209 SEDKRKEMPSSVN-----------ITLKNMEQSQQLPEEMLNTLQSQNIKPKNCGELRSC 355
           +E K+ E  S+             +     ++     ++    LQ +N+ P  C E    
Sbjct: 293 AELKKNESQSNPTKPGLSVDSGKLVQPPTQQKQSSNQDQQYPPLQRENLCPNTCKE---N 349

Query: 356 NGKTSAWLEGPVSVQMRPTRPLDANVPLERHHLGRQPLTNMN 481
            G     L+ P  +Q        AN     +H  R+PL +MN
Sbjct: 350 IGVPQNMLKFPQEIQHSKHDGCFAN-----NHSHREPLRSMN 386


Top