BLASTX nr result

ID: Cephaelis21_contig00019885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019885
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloropl...   142   4e-32
ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloropl...   142   4e-32
emb|CBI33662.3| unnamed protein product [Vitis vinifera]              142   4e-32
ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycin...   140   2e-31
ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula] ...   140   2e-31

>ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cucumis
           sativus] gi|449484535|ref|XP_004156909.1| PREDICTED: 30S
           ribosomal protein 3, chloroplastic-like [Cucumis
           sativus]
          Length = 192

 Score =  142 bits (359), Expect = 4e-32
 Identities = 65/87 (74%), Positives = 72/87 (82%)
 Frame = +1

Query: 385 VVKPMEKPRLVLKFIWMQKNIGISIDQVIPGYGTIPLSPYYFWPRKDAWEQLKTLLESKS 564
           VVKPMEKPRLVLKFIWM+KNIGI++DQ+IPG+GTIPLSPYYFWPRKDAWE+LK LLESK 
Sbjct: 104 VVKPMEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKP 163

Query: 565 WISXXXXXXXXXXXXDIINLWQQSGGD 645
           WIS            DIINLWQQ GG+
Sbjct: 164 WISQKQMIILLNQATDIINLWQQGGGN 190


>ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform 1
           [Vitis vinifera] gi|359488272|ref|XP_003633730.1|
           PREDICTED: 30S ribosomal protein 3, chloroplastic-like
           isoform 2 [Vitis vinifera]
          Length = 176

 Score =  142 bits (359), Expect = 4e-32
 Identities = 64/87 (73%), Positives = 72/87 (82%)
 Frame = +1

Query: 385 VVKPMEKPRLVLKFIWMQKNIGISIDQVIPGYGTIPLSPYYFWPRKDAWEQLKTLLESKS 564
           VVKPMEKPRLVLKFIWM+KNIG+++DQ IPG+GTIPLSPYYFWPRKDAWE++K LLESK 
Sbjct: 88  VVKPMEKPRLVLKFIWMEKNIGVALDQAIPGHGTIPLSPYYFWPRKDAWEEIKVLLESKP 147

Query: 565 WISXXXXXXXXXXXXDIINLWQQSGGD 645
           WIS            DIINLWQQSGG+
Sbjct: 148 WISQKQMIILLNQATDIINLWQQSGGN 174


>emb|CBI33662.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  142 bits (359), Expect = 4e-32
 Identities = 64/87 (73%), Positives = 72/87 (82%)
 Frame = +1

Query: 385 VVKPMEKPRLVLKFIWMQKNIGISIDQVIPGYGTIPLSPYYFWPRKDAWEQLKTLLESKS 564
           VVKPMEKPRLVLKFIWM+KNIG+++DQ IPG+GTIPLSPYYFWPRKDAWE++K LLESK 
Sbjct: 87  VVKPMEKPRLVLKFIWMEKNIGVALDQAIPGHGTIPLSPYYFWPRKDAWEEIKVLLESKP 146

Query: 565 WISXXXXXXXXXXXXDIINLWQQSGGD 645
           WIS            DIINLWQQSGG+
Sbjct: 147 WISQKQMIILLNQATDIINLWQQSGGN 173


>ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycine max]
           gi|255628049|gb|ACU14369.1| unknown [Glycine max]
          Length = 158

 Score =  140 bits (353), Expect = 2e-31
 Identities = 63/89 (70%), Positives = 73/89 (82%)
 Frame = +1

Query: 385 VVKPMEKPRLVLKFIWMQKNIGISIDQVIPGYGTIPLSPYYFWPRKDAWEQLKTLLESKS 564
           VVKP EKPRLVLKFIWM+KNIGI++DQ++PG+GTIPLSPYYFWPRKDAWE+LK LLE+K 
Sbjct: 70  VVKPTEKPRLVLKFIWMEKNIGIALDQMVPGHGTIPLSPYYFWPRKDAWEELKELLENKP 129

Query: 565 WISXXXXXXXXXXXXDIINLWQQSGGDFT 651
           WIS            DIINLWQQSGG+ +
Sbjct: 130 WISQKQMIILLNQATDIINLWQQSGGNLS 158


>ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula]
           gi|217075300|gb|ACJ86010.1| unknown [Medicago
           truncatula] gi|355495807|gb|AES77010.1| 30S ribosomal
           protein [Medicago truncatula]
           gi|388491518|gb|AFK33825.1| unknown [Medicago
           truncatula]
          Length = 161

 Score =  140 bits (353), Expect = 2e-31
 Identities = 64/89 (71%), Positives = 72/89 (80%)
 Frame = +1

Query: 385 VVKPMEKPRLVLKFIWMQKNIGISIDQVIPGYGTIPLSPYYFWPRKDAWEQLKTLLESKS 564
           VVKP +KPRLVLKFIWM+KNIGI +DQ+IPG+GTIPLSPYYFWPRKDAWE+LK LLESK 
Sbjct: 72  VVKPTDKPRLVLKFIWMEKNIGIGLDQMIPGHGTIPLSPYYFWPRKDAWEELKELLESKP 131

Query: 565 WISXXXXXXXXXXXXDIINLWQQSGGDFT 651
           WIS            DIINLWQQSGG+ +
Sbjct: 132 WISQKQMIILLNQATDIINLWQQSGGNLS 160


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