BLASTX nr result

ID: Cephaelis21_contig00019861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019861
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510791.1| pentatricopeptide repeat-containing protein,...    87   1e-15
ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containi...    83   2e-14
ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14
ref|XP_003638369.1| Pentatricopeptide repeat-containing protein ...    81   8e-14
ref|XP_004157226.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12

>ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549906|gb|EEF51393.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 475

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/71 (63%), Positives = 53/71 (74%)
 Frame = -1

Query: 215 NFSSRSSFIENVRNDAKNIIEILWQDGPGFDAIGALDDLGVRVSGLLVRQVLLGILTNIS 36
           N+S R  F ENVR DA  +++IL QDGPGFDA  AL +L +RVSGLLVR+VL GIL NI 
Sbjct: 67  NYSQRKWFFENVRIDAARVLDILRQDGPGFDAKAALSELDLRVSGLLVREVLAGILRNIG 126

Query: 35  CVNKSRSAKLG 3
             NK+R AKLG
Sbjct: 127 IDNKTRCAKLG 137


>ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like isoform 1 [Glycine max]
           gi|356575967|ref|XP_003556107.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g60050-like isoform 2 [Glycine max]
          Length = 480

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/71 (59%), Positives = 52/71 (73%)
 Frame = -1

Query: 218 RNFSSRSSFIENVRNDAKNIIEILWQDGPGFDAIGALDDLGVRVSGLLVRQVLLGILTNI 39
           + FS R  F+E V+ DAK ++E+L QDGPG DA   L +L VR SGLLVR+VL GIL NI
Sbjct: 68  KQFSLRKGFLETVKLDAKRVLEVLRQDGPGLDARLVLGELHVRPSGLLVREVLFGILKNI 127

Query: 38  SCVNKSRSAKL 6
           +C NK+R AKL
Sbjct: 128 NCQNKTRCAKL 138


>ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Glycine max]
          Length = 480

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/71 (57%), Positives = 53/71 (74%)
 Frame = -1

Query: 218 RNFSSRSSFIENVRNDAKNIIEILWQDGPGFDAIGALDDLGVRVSGLLVRQVLLGILTNI 39
           + FS R  F+E V+ DAK ++E+L QDGPG DA   L +L VR+SGLLVR+VL GIL +I
Sbjct: 68  KQFSLRKGFLETVKLDAKRVLEVLRQDGPGLDARLVLGELHVRLSGLLVREVLFGILKHI 127

Query: 38  SCVNKSRSAKL 6
           +C NK+R AKL
Sbjct: 128 NCENKTRCAKL 138


>ref|XP_003638369.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355504304|gb|AES85507.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 501

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/69 (59%), Positives = 52/69 (75%)
 Frame = -1

Query: 212 FSSRSSFIENVRNDAKNIIEILWQDGPGFDAIGALDDLGVRVSGLLVRQVLLGILTNISC 33
           FS R  FIE+V+ DAK  +E+L QDGPG DA   L++LG+R SG+LVR+VL GIL NI+ 
Sbjct: 75  FSLRQGFIESVKLDAKRALEVLRQDGPGLDARLVLEELGIRPSGILVREVLFGILKNINS 134

Query: 32  VNKSRSAKL 6
            NK+R AKL
Sbjct: 135 ENKTRCAKL 143


>ref|XP_004157226.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Cucumis sativus]
          Length = 476

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/71 (54%), Positives = 55/71 (77%)
 Frame = -1

Query: 215 NFSSRSSFIENVRNDAKNIIEILWQDGPGFDAIGALDDLGVRVSGLLVRQVLLGILTNIS 36
           +FS R SF+++ + DA+ +IEIL QDGPGFD   ALD+L ++VSG+LV +VL GIL + S
Sbjct: 64  DFSLRRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKS 123

Query: 35  CVNKSRSAKLG 3
            +NK++ AKLG
Sbjct: 124 VLNKTQCAKLG 134


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