BLASTX nr result

ID: Cephaelis21_contig00019786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019786
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142861.1| PREDICTED: THO complex subunit 2-like [Cucum...   119   3e-25
ref|XP_002527536.1| tho2 protein, putative [Ricinus communis] gi...   114   1e-23
ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glyci...   110   1e-22

>ref|XP_004142861.1| PREDICTED: THO complex subunit 2-like [Cucumis sativus]
           gi|449506883|ref|XP_004162874.1| PREDICTED: THO complex
           subunit 2-like [Cucumis sativus]
          Length = 1887

 Score =  119 bits (298), Expect = 3e-25
 Identities = 51/83 (61%), Positives = 70/83 (84%)
 Frame = -3

Query: 250 MSLPQVDCVFFTEESIKELKNGNTNFKFPNSAPVLRFFYELCWTMVRGELPFQKCKAALE 71
           M+LP V+C++  E +I+E K+GN++F+ P   PV+RF YELCWTMVRG+LPFQKCKAAL+
Sbjct: 1   MALPPVECMYVVESNIREWKSGNSSFRVPQPVPVVRFLYELCWTMVRGDLPFQKCKAALD 60

Query: 70  AVEFTDCVSEEEMGSNFADVVTQ 2
           +VEF++ +S EE+GS FADV+TQ
Sbjct: 61  SVEFSEKMSAEELGSTFADVITQ 83


>ref|XP_002527536.1| tho2 protein, putative [Ricinus communis]
           gi|223533086|gb|EEF34845.1| tho2 protein, putative
           [Ricinus communis]
          Length = 1828

 Score =  114 bits (284), Expect = 1e-23
 Identities = 49/83 (59%), Positives = 67/83 (80%)
 Frame = -3

Query: 250 MSLPQVDCVFFTEESIKELKNGNTNFKFPNSAPVLRFFYELCWTMVRGELPFQKCKAALE 71
           MSLP +DC++  E+ I+E K+G+++F+ P+  P+LRF YELCWTMVRGELP+ KCKAALE
Sbjct: 1   MSLPPIDCIYVREDYIREWKSGSSSFRVPDPVPMLRFLYELCWTMVRGELPYLKCKAALE 60

Query: 70  AVEFTDCVSEEEMGSNFADVVTQ 2
           +VE+T+ VS   + S FAD+VTQ
Sbjct: 61  SVEYTESVSARVLASTFADIVTQ 83


>ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|222862350|gb|EEE99856.1|
           predicted protein [Populus trichocarpa]
          Length = 1836

 Score =  113 bits (283), Expect = 1e-23
 Identities = 49/82 (59%), Positives = 66/82 (80%)
 Frame = -3

Query: 247 SLPQVDCVFFTEESIKELKNGNTNFKFPNSAPVLRFFYELCWTMVRGELPFQKCKAALEA 68
           +LP ++C++ TEE ++ELK GN +F+ P+  P+LRF YEL W +VRGELPFQKCKAAL++
Sbjct: 4   TLPPMECLYVTEEFLRELKGGNHSFRLPHPVPILRFLYELSWNLVRGELPFQKCKAALDS 63

Query: 67  VEFTDCVSEEEMGSNFADVVTQ 2
           VEF D VS   +GSNFAD++TQ
Sbjct: 64  VEFVDKVSAVGLGSNFADIITQ 85


>ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|222839197|gb|EEE77548.1|
           predicted protein [Populus trichocarpa]
          Length = 1805

 Score =  112 bits (279), Expect = 4e-23
 Identities = 49/82 (59%), Positives = 66/82 (80%)
 Frame = -3

Query: 247 SLPQVDCVFFTEESIKELKNGNTNFKFPNSAPVLRFFYELCWTMVRGELPFQKCKAALEA 68
           +LP ++C+  TEE + ELK+GN +F+ P+  P+LRF YEL WT+VRGELPFQKCKAAL++
Sbjct: 4   TLPPMECLHVTEEFLLELKSGNRSFRLPHPVPILRFLYELSWTLVRGELPFQKCKAALDS 63

Query: 67  VEFTDCVSEEEMGSNFADVVTQ 2
           VEF D +S   +GSNFAD++TQ
Sbjct: 64  VEFVDKMSAVGLGSNFADIITQ 85


>ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glycine max]
          Length = 1829

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/83 (59%), Positives = 63/83 (75%)
 Frame = -3

Query: 250 MSLPQVDCVFFTEESIKELKNGNTNFKFPNSAPVLRFFYELCWTMVRGELPFQKCKAALE 71
           MSLP ++C + TEE I+E ++GN   K     P+LRF YELCWTMVRGELPFQKCK AL+
Sbjct: 1   MSLPPIECAYVTEECIREWRSGNPALKVSQPVPMLRFLYELCWTMVRGELPFQKCKVALD 60

Query: 70  AVEFTDCVSEEEMGSNFADVVTQ 2
           +V F+D  S E++ SNF+D+VTQ
Sbjct: 61  SVIFSDKASNEKIASNFSDIVTQ 83


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