BLASTX nr result

ID: Cephaelis21_contig00019782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019782
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis]             80   4e-13
emb|CBI24922.3| unnamed protein product [Vitis vinifera]               78   2e-12
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...    78   2e-12
ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002517802.1| DNA topoisomerase II, putative [Ricinus comm...    77   3e-12

>dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis]
          Length = 1469

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 52/110 (47%), Positives = 64/110 (58%)
 Frame = +3

Query: 3    KRGPAAKRNSQLVGQKLIAEVLKPTENLGISLEKKVRRMRQSPFNKKSGSVLGKLSQKED 182
            KRGP+AK++SQLVGQKLI EVLKP  +   S EKKVRRMR+SPFNKKS S+LGK    +D
Sbjct: 1350 KRGPSAKQSSQLVGQKLITEVLKPAAD--DSPEKKVRRMRESPFNKKSSSILGKTINIDD 1407

Query: 183  NNKVSLXXXXXXXXXXXXXXXXXXXLGQFVAPRARPQRGGGKRGKAVYVL 332
            +++                           A  ARP+R    RGKA YV+
Sbjct: 1408 DDEEETSGTSSMNEG---------------AAAARPKR--ANRGKAKYVI 1440


>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 37/60 (61%), Positives = 46/60 (76%)
 Frame = +3

Query: 3    KRGPAAKRNSQLVGQKLIAEVLKPTENLGISLEKKVRRMRQSPFNKKSGSVLGKLSQKED 182
            KRG A K+  QL+GQ L+ E+ KP E LGIS EKKVR+MR SPFNKKSGSVLG   ++++
Sbjct: 1330 KRGAANKQQPQLLGQTLLTEIFKPAETLGISPEKKVRKMRASPFNKKSGSVLGSTGEEDE 1389


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 37/60 (61%), Positives = 46/60 (76%)
 Frame = +3

Query: 3    KRGPAAKRNSQLVGQKLIAEVLKPTENLGISLEKKVRRMRQSPFNKKSGSVLGKLSQKED 182
            KRG A K+  QL+GQ L+ E+ KP E LGIS EKKVR+MR SPFNKKSGSVLG   ++++
Sbjct: 1367 KRGAANKQQPQLLGQTLLTEIFKPAETLGISPEKKVRKMRASPFNKKSGSVLGSTGEEDE 1426


>ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|222850454|gb|EEE88001.1|
            predicted protein [Populus trichocarpa]
          Length = 1482

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 46/107 (42%), Positives = 63/107 (58%)
 Frame = +3

Query: 3    KRGPAAKRNSQLVGQKLIAEVLKPTENLGISLEKKVRRMRQSPFNKKSGSVLGKLSQKED 182
            +RGPA+++ SQ +GQKL+ E+LKP E  GIS EKKVR++R SPFNKKSGSVLG++ +++D
Sbjct: 1363 RRGPASQQ-SQGLGQKLLTEMLKPAEGAGISPEKKVRKVRASPFNKKSGSVLGRIHKEDD 1421

Query: 183  NNKVSLXXXXXXXXXXXXXXXXXXXLGQFVAPRARPQRGGGKRGKAV 323
                 +                       V  RARPQR   K+ + V
Sbjct: 1422 TGSEPMSASSSENTDVID-----------VPARARPQRANRKQTRYV 1457


>ref|XP_002517802.1| DNA topoisomerase II, putative [Ricinus communis]
            gi|223543074|gb|EEF44609.1| DNA topoisomerase II,
            putative [Ricinus communis]
          Length = 1212

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 39/57 (68%), Positives = 48/57 (84%)
 Frame = +3

Query: 3    KRGPAAKRNSQLVGQKLIAEVLKPTENLGISLEKKVRRMRQSPFNKKSGSVLGKLSQ 173
            KRGP  K+ SQ +GQKL+ E+LKP EN GIS EKKVR+MR SPFNKKSGSVLG++++
Sbjct: 1080 KRGPT-KKESQGLGQKLLTEMLKPAENPGISPEKKVRKMRASPFNKKSGSVLGRVAK 1135


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