BLASTX nr result

ID: Cephaelis21_contig00019740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019740
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|2...   174   1e-41
ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II tra...   171   1e-40
emb|CBI27822.3| unnamed protein product [Vitis vinifera]              166   2e-39
ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymera...   166   2e-39
emb|CAN67376.1| hypothetical protein VITISV_017913 [Vitis vinifera]   166   2e-39

>ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|222833473|gb|EEE71950.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  174 bits (441), Expect = 1e-41
 Identities = 84/109 (77%), Positives = 96/109 (88%), Gaps = 2/109 (1%)
 Frame = -3

Query: 591 GFQYQLGDFQLRVGKVVPIHSENLRGIVMEMEYLPISSWEKSHKIMGEFFDIWQEALSKR 412
           GFQYQLGDFQLRVGKV P HS+NLRGI+ME+EYLP+SS +KS ++M EF DIWQEA+SKR
Sbjct: 113 GFQYQLGDFQLRVGKVTPTHSDNLRGIIMEVEYLPLSSIDKSRQVMEEFVDIWQEAISKR 172

Query: 411 SLAGHFVHIEPNFAEFGLSDEYSSQHTAAQYAGIMAQLIAT--VQAARN 271
           SL GHF+H+EPNF E+GLSD YSSQHTA QYA +MAQLIAT  VQAARN
Sbjct: 173 SLPGHFMHMEPNFVEYGLSDHYSSQHTAVQYATVMAQLIATQSVQAARN 221


>ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Cucumis sativus]
           gi|449488087|ref|XP_004157936.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 20a-like
           [Cucumis sativus]
          Length = 223

 Score =  171 bits (432), Expect = 1e-40
 Identities = 83/110 (75%), Positives = 95/110 (86%)
 Frame = -3

Query: 591 GFQYQLGDFQLRVGKVVPIHSENLRGIVMEMEYLPISSWEKSHKIMGEFFDIWQEALSKR 412
           GFQYQLGDFQLRVGKVVP +SENLRGIVME+EYLPISS EKS ++M EFFD+WQEA+SK 
Sbjct: 114 GFQYQLGDFQLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSRQVMEEFFDVWQEAMSKS 173

Query: 411 SLAGHFVHIEPNFAEFGLSDEYSSQHTAAQYAGIMAQLIATVQAARN*TN 262
           SL G F+HIE NFAE+GLSD Y+SQHTA QY  +MAQLIATVQA ++  N
Sbjct: 174 SLPGRFMHIESNFAEYGLSDYYTSQHTAVQYGNVMAQLIATVQAVQSARN 223


>emb|CBI27822.3| unnamed protein product [Vitis vinifera]
          Length = 223

 Score =  166 bits (421), Expect = 2e-39
 Identities = 81/110 (73%), Positives = 92/110 (83%)
 Frame = -3

Query: 591 GFQYQLGDFQLRVGKVVPIHSENLRGIVMEMEYLPISSWEKSHKIMGEFFDIWQEALSKR 412
           GFQYQLGDFQLRVGKV P  SENLRGIV E+EYLP+SS EKS +I+  F +IWQEA+SKR
Sbjct: 114 GFQYQLGDFQLRVGKVAPSASENLRGIVFEVEYLPLSSMEKSRQILDGFVEIWQEAMSKR 173

Query: 411 SLAGHFVHIEPNFAEFGLSDEYSSQHTAAQYAGIMAQLIATVQAARN*TN 262
           SL GHF+HIEPNFAEFGLSD Y+SQHTA QYA +MAQLI+ VQ A+   N
Sbjct: 174 SLPGHFMHIEPNFAEFGLSDHYTSQHTAVQYATVMAQLISAVQTAQGVRN 223


>ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 20-like [Vitis vinifera]
          Length = 222

 Score =  166 bits (421), Expect = 2e-39
 Identities = 81/110 (73%), Positives = 92/110 (83%)
 Frame = -3

Query: 591 GFQYQLGDFQLRVGKVVPIHSENLRGIVMEMEYLPISSWEKSHKIMGEFFDIWQEALSKR 412
           GFQYQLGDFQLRVGKV P  SENLRGIV E+EYLP+SS EKS +I+  F +IWQEA+SKR
Sbjct: 113 GFQYQLGDFQLRVGKVAPSASENLRGIVFEVEYLPLSSMEKSRQILDGFVEIWQEAMSKR 172

Query: 411 SLAGHFVHIEPNFAEFGLSDEYSSQHTAAQYAGIMAQLIATVQAARN*TN 262
           SL GHF+HIEPNFAEFGLSD Y+SQHTA QYA +MAQLI+ VQ A+   N
Sbjct: 173 SLPGHFMHIEPNFAEFGLSDHYTSQHTAVQYATVMAQLISAVQTAQGVRN 222


>emb|CAN67376.1| hypothetical protein VITISV_017913 [Vitis vinifera]
          Length = 242

 Score =  166 bits (421), Expect = 2e-39
 Identities = 81/110 (73%), Positives = 92/110 (83%)
 Frame = -3

Query: 591 GFQYQLGDFQLRVGKVVPIHSENLRGIVMEMEYLPISSWEKSHKIMGEFFDIWQEALSKR 412
           GFQYQLGDFQLRVGKV P  SENLRGIV E+EYLP+SS EKS +I+  F +IWQEA+SKR
Sbjct: 133 GFQYQLGDFQLRVGKVAPSASENLRGIVFEVEYLPLSSMEKSRQILDGFVEIWQEAMSKR 192

Query: 411 SLAGHFVHIEPNFAEFGLSDEYSSQHTAAQYAGIMAQLIATVQAARN*TN 262
           SL GHF+HIEPNFAEFGLSD Y+SQHTA QYA +MAQLI+ VQ A+   N
Sbjct: 193 SLPGHFMHIEPNFAEFGLSDHYTSQHTAVQYATVMAQLISAVQTAQGVRN 242


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