BLASTX nr result

ID: Cephaelis21_contig00019672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019672
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...   207   2e-51
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]             194   2e-47
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]             194   2e-47
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]             193   4e-47
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   189   6e-46

>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score =  207 bits (528), Expect = 2e-51
 Identities = 102/257 (39%), Positives = 147/257 (57%)
 Frame = +2

Query: 2   SSIYFSGNVSSQTQKIIKEELGFNITSKLGNYLGVPVLHGRKSKSSYIDLIQKVDAKIGG 181
           + +YFS NV +  ++ I +  GFN  + LG YLG  +  GR S+  +  +I K+  K+ G
Sbjct: 149 TQVYFSKNVDNHLREDIIQHTGFNQVNSLGKYLGANITPGRTSRGHFNHIINKIQNKLSG 208

Query: 182 WKHKQLTFAGRVTLASSVLQSIPIYTMQTAMLPFGICDKIDKIIRNFIWGSSQDSKGMHL 361
           WK + L+ AGR+TL+  V+ SIP Y MQ A +P  ICD+I+KI R F+WG S   +  HL
Sbjct: 209 WKQQCLSLAGRITLSKFVISSIPYYHMQYAKIPKTICDEIEKIQRGFVWGDSNQGRKAHL 268

Query: 362 VNWNTVCKPKSHGGLGLRKSRTVNEAFLIKLAWNFYINPASLCSTVLKHKYFHNGLNFQA 541
           V+W+  C PK +GGLG ++   +NEAFL+K+ WN    P  L   VL  KY  N      
Sbjct: 269 VSWDVCCLPKMNGGLGFKRPHHMNEAFLMKMLWNLIKQPDKLWCRVLYSKYGRNNDLNNN 328

Query: 542 LKNVEGASPIWKAIVKVWDKMKSGCRWTLGNGLSVNFWLDWWVPEVGPLIDYISCEVPDS 721
           + +    SP+WKAIV +WD  K    W +G+G S NFWLD W+     L    +    D+
Sbjct: 329 ISSQPYDSPLWKAIVGIWDDFKRHVIWQIGDGRSTNFWLDKWISNNTSLFSSSTQSYVDT 388

Query: 722 VLSMKVNQFVHDSGLWN 772
            +S  V   ++ SG+W+
Sbjct: 389 TIS--VRDAINTSGVWD 403


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  194 bits (493), Expect = 2e-47
 Identities = 95/257 (36%), Positives = 143/257 (55%)
 Frame = +2

Query: 2    SSIYFSGNVSSQTQKIIKEELGFNITSKLGNYLGVPVLHGRKSKSSYIDLIQKVDAKIGG 181
            S ++ S NV++  ++ I   L   +   LG YLG+P+L  R S++++  +I K+  K+  
Sbjct: 723  SLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSS 782

Query: 182  WKHKQLTFAGRVTLASSVLQSIPIYTMQTAMLPFGICDKIDKIIRNFIWGSSQDSKGMHL 361
            WK   L  AGR  L  + L ++P YTMQ   LP   C++IDK  RNF+WG   +++ +H 
Sbjct: 783  WKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHS 842

Query: 362  VNWNTVCKPKSHGGLGLRKSRTVNEAFLIKLAWNFYINPASLCSTVLKHKYFHNGLNFQA 541
            VNW  +CKP++ GGLGLR +R  N AFL K+AW  + N   L   VL+ KY  N  +F  
Sbjct: 843  VNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNA-DFLH 901

Query: 542  LKNVEGASPIWKAIVKVWDKMKSGCRWTLGNGLSVNFWLDWWVPEVGPLIDYISCEVPDS 721
            L++    S  W++I+K  D +    +W +GNG  +NFW DWWV + GPL     C     
Sbjct: 902  LQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGD-GPLASNTDCINQPH 960

Query: 722  VLSMKVNQFVHDSGLWN 772
            +  +KV   +     W+
Sbjct: 961  MTDIKVEDLITSQRRWD 977


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  194 bits (493), Expect = 2e-47
 Identities = 95/257 (36%), Positives = 143/257 (55%)
 Frame = +2

Query: 2    SSIYFSGNVSSQTQKIIKEELGFNITSKLGNYLGVPVLHGRKSKSSYIDLIQKVDAKIGG 181
            S ++ S NV++  ++ I   L   +   LG YLG+P+L  R S++++  +I K+  K+  
Sbjct: 723  SLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSS 782

Query: 182  WKHKQLTFAGRVTLASSVLQSIPIYTMQTAMLPFGICDKIDKIIRNFIWGSSQDSKGMHL 361
            WK   L  AGR  L  + L ++P YTMQ   LP   C++IDK  RNF+WG   +++ +H 
Sbjct: 783  WKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHS 842

Query: 362  VNWNTVCKPKSHGGLGLRKSRTVNEAFLIKLAWNFYINPASLCSTVLKHKYFHNGLNFQA 541
            VNW  +CKP++ GGLGLR +R  N AFL K+AW  + N   L   VL+ KY  N  +F  
Sbjct: 843  VNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNA-DFLH 901

Query: 542  LKNVEGASPIWKAIVKVWDKMKSGCRWTLGNGLSVNFWLDWWVPEVGPLIDYISCEVPDS 721
            L++    S  W++I+K  D +    +W +GNG  +NFW DWWV + GPL     C     
Sbjct: 902  LQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGD-GPLASNTDCINQPH 960

Query: 722  VLSMKVNQFVHDSGLWN 772
            +  +KV   +     W+
Sbjct: 961  MTDIKVEDLITSQRRWD 977


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score =  193 bits (490), Expect = 4e-47
 Identities = 95/257 (36%), Positives = 142/257 (55%)
 Frame = +2

Query: 2    SSIYFSGNVSSQTQKIIKEELGFNITSKLGNYLGVPVLHGRKSKSSYIDLIQKVDAKIGG 181
            S ++ S NV++  ++ I   L   +   LG YLG+P+L  R S++++  +I K+  K+  
Sbjct: 1255 SLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSS 1314

Query: 182  WKHKQLTFAGRVTLASSVLQSIPIYTMQTAMLPFGICDKIDKIIRNFIWGSSQDSKGMHL 361
            WK   L  AGR  L  + L ++P YTMQ   LP   C++IDK  RNF+WG   +++ +H 
Sbjct: 1315 WKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHS 1374

Query: 362  VNWNTVCKPKSHGGLGLRKSRTVNEAFLIKLAWNFYINPASLCSTVLKHKYFHNGLNFQA 541
            VNW  +CKP++ GGLGLR +R  N AFL K+AW  + N   L   VL+ KY  N  +F  
Sbjct: 1375 VNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNA-DFLH 1433

Query: 542  LKNVEGASPIWKAIVKVWDKMKSGCRWTLGNGLSVNFWLDWWVPEVGPLIDYISCEVPDS 721
            L++    S  W++I+K  D +    +W +GNG  +NFW DWWV + GPL     C     
Sbjct: 1434 LQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGD-GPLASNTDCINQPH 1492

Query: 722  VLSMKVNQFVHDSGLWN 772
            +  +KV         W+
Sbjct: 1493 MTDIKVEDLTTSQRRWD 1509


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  189 bits (480), Expect = 6e-46
 Identities = 93/262 (35%), Positives = 160/262 (61%), Gaps = 3/262 (1%)
 Frame = +2

Query: 2    SSIYFSGNVSSQTQKIIKEELGFNITSKLGNYLGVPVLHGRKSKSSYIDLIQKVDAKIGG 181
            S I+FS NVS + +++I EE G   T +LG YLG+P+L  R +K ++ +++++V A++ G
Sbjct: 582  SKIFFSHNVSREMEQLISEESGIGCTKELGKYLGMPILQKRMNKETFGEVLERVSARLAG 641

Query: 182  WKHKQLTFAGRVTLASSVLQSIPIYTMQTAMLPFGICDKIDKIIRNFIWGSSQDSKGMHL 361
            WK + L+ AGR+TL  +VL SIP++ M   +LP    D +D+  R F+WGS+ + K  HL
Sbjct: 642  WKGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEKKKQHL 701

Query: 362  VNWNTVCKPKSHGGLGLRKSRTVNEAFLIKLAWNFYINPASLCSTVLKHKYFHNGLNFQA 541
            ++W  +CKPK+ GG+GLR +R +N+A + K+ W    +  SL + V++ KY   G+   +
Sbjct: 702  LSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVVRKKYKVGGVQDTS 761

Query: 542  -LKNVEGASPIWKAI-VKVWDKMKSGCRWTLGNGLSVNFWLDWWVPEVGPLIDYISCEVP 715
             LK     S  W+++ V + + +  G  W  G+G ++ FWLD W+ +  PL++  +  +P
Sbjct: 762  WLKPQPRWSSTWRSVAVGLREVVVKGVGWVPGDGCTIRFWLDRWLLQ-EPLVELGTDMIP 820

Query: 716  DSV-LSMKVNQFVHDSGLWNKE 778
            +   + +  + ++  SG WN E
Sbjct: 821  EGERIKVAADYWLPGSG-WNLE 841


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