BLASTX nr result

ID: Cephaelis21_contig00019583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019583
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19
emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]    99   4e-19
ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containi...    83   2e-14
ref|XP_002532248.1| pentatricopeptide repeat-containing protein,...    83   2e-14

>ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 44/65 (67%), Positives = 56/65 (86%)
 Frame = -1

Query: 376 ATSNEILVSLCEAGKAANAVMVLFGLVEMGFKPLPDTWTVLVDIVCRERKLLPTFELLDK 197
           ATSNE+LV LCEAGK  +AVM L GL+E+GFKP P++W +LV+++CRERKLLP FELLD 
Sbjct: 448 ATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDD 507

Query: 196 LVVQD 182
           LV+Q+
Sbjct: 508 LVIQE 512


>emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
          Length = 714

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 44/65 (67%), Positives = 56/65 (86%)
 Frame = -1

Query: 376 ATSNEILVSLCEAGKAANAVMVLFGLVEMGFKPLPDTWTVLVDIVCRERKLLPTFELLDK 197
           ATSNE+LV LCEAGK  +AVM L GL+E+GFKP P++W +LV+++CRERKLLP FELLD 
Sbjct: 491 ATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDD 550

Query: 196 LVVQD 182
           LV+Q+
Sbjct: 551 LVIQE 555


>ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|222842808|gb|EEE80355.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/71 (61%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
 Frame = -1

Query: 376 ATSNEILVSLCEAGKAANAVMVLFGLVEMGFKPLPDTWTVLVDIVCRERKLLPTFELLDK 197
           ATSNE+LV LC+AG A +AV+ L+GL EMGFKP  D+W +LV+ VCRERKLL  FELLD+
Sbjct: 438 ATSNELLVGLCKAGMADDAVVALYGLAEMGFKPEQDSWALLVEFVCRERKLLLAFELLDE 497

Query: 196 LVV---QDFSP 173
           L     +DF P
Sbjct: 498 LTANECEDFVP 508


>ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Glycine max]
          Length = 546

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/63 (63%), Positives = 50/63 (79%)
 Frame = -1

Query: 376 ATSNEILVSLCEAGKAANAVMVLFGLVEMGFKPLPDTWTVLVDIVCRERKLLPTFELLDK 197
           ATSNE+LV LC+AG   +A + LF LVEMGF+P  +TW VL+ ++CRERKLL  FELLD+
Sbjct: 481 ATSNELLVCLCKAGMVDDAAVALFDLVEMGFQPGLETWEVLIGLICRERKLLYVFELLDE 540

Query: 196 LVV 188
           LVV
Sbjct: 541 LVV 543


>ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528066|gb|EEF30142.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/65 (60%), Positives = 49/65 (75%)
 Frame = -1

Query: 376 ATSNEILVSLCEAGKAANAVMVLFGLVEMGFKPLPDTWTVLVDIVCRERKLLPTFELLDK 197
           ATSNE+LV LCEAG   NAV  LFGL +MGF P P +W  L++ +CRERKLL  FEL+D+
Sbjct: 447 ATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFVFELVDE 506

Query: 196 LVVQD 182
           LV ++
Sbjct: 507 LVEKE 511


Top