BLASTX nr result

ID: Cephaelis21_contig00019581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019581
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239632.1| uncharacterized protein LOC100789250 [Glycin...    58   7e-07
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    58   9e-07
ref|XP_003605042.1| F-box/kelch-repeat protein [Medicago truncat...    57   2e-06
ref|XP_002518046.1| ubiquitin-protein ligase, putative [Ricinus ...    56   3e-06
ref|XP_002331674.1| f-box family protein [Populus trichocarpa] g...    56   3e-06

>ref|NP_001239632.1| uncharacterized protein LOC100789250 [Glycine max]
           gi|255648259|gb|ACU24582.1| unknown [Glycine max]
          Length = 95

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
 Frame = -3

Query: 237 FSDDIIIEILSRLPGKMLFRFKCVCKSWNSLISKPNF---RLSTAGRERVIM----SCLP 79
           FS D+I+EIL RLP K L RFKCVCKSW S IS P+F    L  A   + ++    S  P
Sbjct: 5   FSHDLIVEILLRLPIKSLLRFKCVCKSWLSFISDPHFVKSHLVVAPTNQTLLDYDFSICP 64

Query: 78  EPGGYTRRFYSWGM 37
            P G     + WG+
Sbjct: 65  NPSG----MHIWGI 74


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = -3

Query: 315 LSRYKPLSTHKAWREKKMKRHVSKVQFSDDIIIEILSRLPGKMLFRFKCVCKSWNSLISK 136
           + R  PL      +++ M   +      D++++EILSRLP K L +F+CVCKSW SLIS 
Sbjct: 23  MDRTSPLPPSSVPKQQPMSESLPLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMSLISD 82

Query: 135 PNF 127
           P F
Sbjct: 83  PYF 85


>ref|XP_003605042.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355506097|gb|AES87239.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 357

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = -3

Query: 264 MKRHVSKVQFSDDIIIEILSRLPGKMLFRFKCVCKSWNSLISKPNFRLS 118
           M++  + V    D+II IL RLP K L RFKCVCKSW SLIS+P+F  S
Sbjct: 1   MEKKKTSVHLPHDLIILILLRLPVKYLIRFKCVCKSWFSLISEPHFAKS 49


>ref|XP_002518046.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223542642|gb|EEF44179.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 257

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = -3

Query: 228 DIIIEILSRLPGKMLFRFKCVCKSWNSLISKPNF 127
           D+I EILSR+P K L RFKC+CK+WNSLIS P F
Sbjct: 7   DLITEILSRVPVKPLIRFKCICKTWNSLISNPEF 40


>ref|XP_002331674.1| f-box family protein [Populus trichocarpa]
           gi|222874093|gb|EEF11224.1| f-box family protein
           [Populus trichocarpa]
          Length = 441

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = -3

Query: 231 DDIIIEILSRLPGKMLFRFKCVCKSWNSLISKPNF 127
           +D++IEILSRLP K L +FKCVCKSW ++I+ PNF
Sbjct: 44  EDVVIEILSRLPVKNLLQFKCVCKSWYAIITSPNF 78


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