BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019553
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD17351.1| contains similarity to retrovirus-related polypro...   151   5e-35
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         149   2e-34
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   149   2e-34
dbj|BAH80072.1| putative unclassified retrotransposon protein [O...   149   2e-34
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]                149   2e-34

>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
           zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
           E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
           putative polyprotein [Arabidopsis thaliana]
          Length = 1138

 Score =  151 bits (382), Expect = 5e-35
 Identities = 71/97 (73%), Positives = 80/97 (82%)
 Frame = +1

Query: 1   NAFNQLKRDLTTAPIFVLPDFNQTFEIECDALGTGIGAVLKQGARPIAYFSEKLNGTILN 180
           +AF  LK  LT AP+  LPDF +TFEIECDA G GIGAVL Q  +PIAYFSEKL G  LN
Sbjct: 601 DAFQALKEKLTHAPVLSLPDFLKTFEIECDAPGVGIGAVLMQDKKPIAYFSEKLGGATLN 660

Query: 181 YPTYNKELYVVIRALETWQHYLFPKEFVIHTDHESLK 291
           YPTY+KELY ++RAL+TWQHYL+PKEFVIHTDHESLK
Sbjct: 661 YPTYDKELYALVRALQTWQHYLWPKEFVIHTDHESLK 697


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  149 bits (376), Expect = 2e-34
 Identities = 67/97 (69%), Positives = 82/97 (84%)
 Frame = +1

Query: 1    NAFNQLKRDLTTAPIFVLPDFNQTFEIECDALGTGIGAVLKQGARPIAYFSEKLNGTILN 180
            +AFN LK  LT AP+  LPDFN+TFE+ECDA G G+G VL Q  +P+AYFSEKL+G++LN
Sbjct: 993  HAFNVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGSVLN 1052

Query: 181  YPTYNKELYVVIRALETWQHYLFPKEFVIHTDHESLK 291
            Y TY+KELY ++R LETWQHYL+PKEFVIH+DHESLK
Sbjct: 1053 YSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLK 1089


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  149 bits (376), Expect = 2e-34
 Identities = 67/97 (69%), Positives = 81/97 (83%)
 Frame = +1

Query: 1    NAFNQLKRDLTTAPIFVLPDFNQTFEIECDALGTGIGAVLKQGARPIAYFSEKLNGTILN 180
            NAF+ LK  LT AP+  LPDFN+TFE+ECDA G G+G VL Q  +P+AYFSEKL+G +LN
Sbjct: 990  NAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLN 1049

Query: 181  YPTYNKELYVVIRALETWQHYLFPKEFVIHTDHESLK 291
            Y TY+KELY ++R LETWQHYL+PKEFVIH+DHESLK
Sbjct: 1050 YSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLK 1086



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/96 (43%), Positives = 58/96 (60%)
 Frame = +1

Query: 4    AFNQLKRDLTTAPIFVLPDFNQTFEIECDALGTGIGAVLKQGARPIAYFSEKLNGTILNY 183
            AF  LK  L ++P+ +LPD  + F + CDA   G+G VL Q    +AY S +L     NY
Sbjct: 1783 AFQTLKEKLVSSPVLILPDTRKDFMVYCDASPQGLGCVLMQEGHVVAYASRQLWPHEGNY 1842

Query: 184  PTYNKELYVVIRALETWQHYLFPKEFVIHTDHESLK 291
            PT++ EL  V+ AL+ W+HYL      I+TDH+SLK
Sbjct: 1843 PTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLK 1878


>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
           Group]
          Length = 848

 Score =  149 bits (376), Expect = 2e-34
 Identities = 67/97 (69%), Positives = 81/97 (83%)
 Frame = +1

Query: 1   NAFNQLKRDLTTAPIFVLPDFNQTFEIECDALGTGIGAVLKQGARPIAYFSEKLNGTILN 180
           NAF+ LK  LT AP+  LPDFN+TFE+ECDA G G+G VL Q  +P+AYFSEKL+G +LN
Sbjct: 354 NAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLN 413

Query: 181 YPTYNKELYVVIRALETWQHYLFPKEFVIHTDHESLK 291
           Y TY+KELY ++R LETWQHYL+PKEFVIH+DHESLK
Sbjct: 414 YSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLK 450


>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
          Length = 1667

 Score =  149 bits (376), Expect = 2e-34
 Identities = 67/97 (69%), Positives = 81/97 (83%)
 Frame = +1

Query: 1    NAFNQLKRDLTTAPIFVLPDFNQTFEIECDALGTGIGAVLKQGARPIAYFSEKLNGTILN 180
            NAF+ LK  LT AP+  LPDFN+TFE+ECDA G G+G VL Q  +P+AYFSEKL+G +LN
Sbjct: 913  NAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLN 972

Query: 181  YPTYNKELYVVIRALETWQHYLFPKEFVIHTDHESLK 291
            Y TY+KELY ++R LETWQHYL+PKEFVIH+DHESLK
Sbjct: 973  YSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLK 1009