BLASTX nr result

ID: Cephaelis21_contig00019542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019542
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein...   256   1e-66
ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|1...   254   8e-66
ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprot...   253   1e-65
gb|ABK93026.1| unknown [Populus trichocarpa]                          250   9e-65
ref|XP_002331278.1| predicted protein [Populus trichocarpa] gi|2...   249   2e-64

>ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis] gi|223534772|gb|EEF36463.1| U3 small
           nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis]
          Length = 182

 Score =  256 bits (655), Expect = 1e-66
 Identities = 123/138 (89%), Positives = 134/138 (97%)
 Frame = -3

Query: 541 KYSKLCRMVQKLVNILKQVDPRDPFRIEMTDALLEKLYNMGVIPSRKSLALCDRLSVSSF 362
           KYS +CRMVQKLVNILKQ+DPRDP+R+EMTD LLEKLYNMGVIPSRKSLALCDRLSVSSF
Sbjct: 45  KYSGICRMVQKLVNILKQMDPRDPYRVEMTDILLEKLYNMGVIPSRKSLALCDRLSVSSF 104

Query: 361 CRRRLSTVLVRLKFAEHLEEAVTYTEQGHIRVGPDTVTDDAFLVTRNMEDFITWVDTSKI 182
           CRRRLSTVL+RLKFAEHL+EA+TY EQGHIRVGP+TVTD AFLVTRNMEDF+TWVDTSKI
Sbjct: 105 CRRRLSTVLMRLKFAEHLKEAITYIEQGHIRVGPETVTDPAFLVTRNMEDFVTWVDTSKI 164

Query: 181 RRKVLEYNDKLDDYDAMN 128
           +RKVLEYN+KLDDYDAMN
Sbjct: 165 KRKVLEYNEKLDDYDAMN 182


>ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|118485533|gb|ABK94619.1|
           unknown [Populus trichocarpa]
           gi|222873150|gb|EEF10281.1| predicted protein [Populus
           trichocarpa]
          Length = 182

 Score =  254 bits (648), Expect = 8e-66
 Identities = 122/138 (88%), Positives = 132/138 (95%)
 Frame = -3

Query: 541 KYSKLCRMVQKLVNILKQVDPRDPFRIEMTDALLEKLYNMGVIPSRKSLALCDRLSVSSF 362
           KYS +CRMVQKL NILKQ+DPRDPFR+EMTD LLEKLYNMGVIPSRKSLALCDRLSVSSF
Sbjct: 45  KYSSVCRMVQKLTNILKQMDPRDPFRVEMTDVLLEKLYNMGVIPSRKSLALCDRLSVSSF 104

Query: 361 CRRRLSTVLVRLKFAEHLEEAVTYTEQGHIRVGPDTVTDDAFLVTRNMEDFITWVDTSKI 182
           CRRRLSTVL+RLKFAEHL+EAVTY EQGHIRVGP+TVTD AFLVTRN EDF+TWVDTSKI
Sbjct: 105 CRRRLSTVLMRLKFAEHLKEAVTYIEQGHIRVGPETVTDPAFLVTRNTEDFVTWVDTSKI 164

Query: 181 RRKVLEYNDKLDDYDAMN 128
           +RKVLEYN+K+DDYDAMN
Sbjct: 165 KRKVLEYNEKVDDYDAMN 182


>ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3 [Vitis
           vinifera] gi|298204446|emb|CBI16926.3| unnamed protein
           product [Vitis vinifera]
          Length = 182

 Score =  253 bits (646), Expect = 1e-65
 Identities = 122/138 (88%), Positives = 134/138 (97%)
 Frame = -3

Query: 541 KYSKLCRMVQKLVNILKQVDPRDPFRIEMTDALLEKLYNMGVIPSRKSLALCDRLSVSSF 362
           KYS LCRMVQKLVNILKQ+DPRDPFRIEMTD LLEKLYN+GVIP+RKSLALCDRL+VSSF
Sbjct: 45  KYSGLCRMVQKLVNILKQMDPRDPFRIEMTDMLLEKLYNIGVIPTRKSLALCDRLAVSSF 104

Query: 361 CRRRLSTVLVRLKFAEHLEEAVTYTEQGHIRVGPDTVTDDAFLVTRNMEDFITWVDTSKI 182
           CRRRLSTVLVRLKFAEHL+EAVTY EQGHIRVGPDTVTD AFLVTRN+EDF+TWVD+SKI
Sbjct: 105 CRRRLSTVLVRLKFAEHLKEAVTYIEQGHIRVGPDTVTDPAFLVTRNLEDFVTWVDSSKI 164

Query: 181 RRKVLEYNDKLDDYDAMN 128
           +RKVL+YN++LDDYDAMN
Sbjct: 165 KRKVLQYNERLDDYDAMN 182


>gb|ABK93026.1| unknown [Populus trichocarpa]
          Length = 182

 Score =  250 bits (639), Expect = 9e-65
 Identities = 119/138 (86%), Positives = 131/138 (94%)
 Frame = -3

Query: 541 KYSKLCRMVQKLVNILKQVDPRDPFRIEMTDALLEKLYNMGVIPSRKSLALCDRLSVSSF 362
           KYS +CRMVQKL NILKQ+DPRDP+R+EMTD LLEKLYNMGVIPSRKSLALCDRLSVSSF
Sbjct: 45  KYSSVCRMVQKLTNILKQMDPRDPYRVEMTDVLLEKLYNMGVIPSRKSLALCDRLSVSSF 104

Query: 361 CRRRLSTVLVRLKFAEHLEEAVTYTEQGHIRVGPDTVTDDAFLVTRNMEDFITWVDTSKI 182
           CRRRLSTVL+RLKFAEHL+EA+TY EQGHIR GP+TVTD AFLVTR+MEDF+TWVDTSKI
Sbjct: 105 CRRRLSTVLMRLKFAEHLKEAITYIEQGHIRAGPETVTDPAFLVTRSMEDFVTWVDTSKI 164

Query: 181 RRKVLEYNDKLDDYDAMN 128
           +RKVLEYN+ LDDYDAMN
Sbjct: 165 KRKVLEYNENLDDYDAMN 182


>ref|XP_002331278.1| predicted protein [Populus trichocarpa] gi|222873703|gb|EEF10834.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  249 bits (636), Expect = 2e-64
 Identities = 118/138 (85%), Positives = 131/138 (94%)
 Frame = -3

Query: 541 KYSKLCRMVQKLVNILKQVDPRDPFRIEMTDALLEKLYNMGVIPSRKSLALCDRLSVSSF 362
           KYS +CRMVQKL NILKQ+DPRDP+R+EMTD LLEKLYNMGVIPSRKSLALCDRLSVSSF
Sbjct: 45  KYSSVCRMVQKLTNILKQMDPRDPYRVEMTDVLLEKLYNMGVIPSRKSLALCDRLSVSSF 104

Query: 361 CRRRLSTVLVRLKFAEHLEEAVTYTEQGHIRVGPDTVTDDAFLVTRNMEDFITWVDTSKI 182
           CRRRLSTVL+RLKF+EHL+EA+TY EQGHIR GP+TVTD AFLVTR+MEDF+TWVDTSKI
Sbjct: 105 CRRRLSTVLMRLKFSEHLKEAITYIEQGHIRAGPETVTDPAFLVTRSMEDFVTWVDTSKI 164

Query: 181 RRKVLEYNDKLDDYDAMN 128
           +RKVLEYN+ LDDYDAMN
Sbjct: 165 KRKVLEYNENLDDYDAMN 182


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