BLASTX nr result

ID: Cephaelis21_contig00019527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00019527
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...    98   8e-19
emb|CBI37506.3| unnamed protein product [Vitis vinifera]               98   8e-19
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...    93   2e-17
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...    93   2e-17
ref|XP_002437492.1| hypothetical protein SORBIDRAFT_10g028030 [S...    92   6e-17

>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Vitis vinifera]
          Length = 636

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/67 (71%), Positives = 56/67 (83%)
 Frame = -3

Query: 203 PLNPLKVCLPSIVEEFLRVAKSSCVFAMPENFVPSGLVESELSMAFGGLERLDMFFPFDP 24
           PL+PLKVCLPSIVEEFLR AK++ +F + E F+ S L+ESELS AFGG+ERLDMFFPFDP
Sbjct: 470 PLSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFDP 529

Query: 23  YLLKVSD 3
            LLK  D
Sbjct: 530 CLLKKCD 536


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/67 (71%), Positives = 56/67 (83%)
 Frame = -3

Query: 203 PLNPLKVCLPSIVEEFLRVAKSSCVFAMPENFVPSGLVESELSMAFGGLERLDMFFPFDP 24
           PL+PLKVCLPSIVEEFLR AK++ +F + E F+ S L+ESELS AFGG+ERLDMFFPFDP
Sbjct: 461 PLSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFDP 520

Query: 23  YLLKVSD 3
            LLK  D
Sbjct: 521 CLLKKCD 527


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Cucumis sativus]
          Length = 625

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/66 (69%), Positives = 54/66 (81%)
 Frame = -3

Query: 200 LNPLKVCLPSIVEEFLRVAKSSCVFAMPENFVPSGLVESELSMAFGGLERLDMFFPFDPY 21
           L+PLKVCLPSIVEEFLR AK + +F   ENF+ +GL+ES+ S +FGGLERLDMFFPFDP 
Sbjct: 461 LSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPC 520

Query: 20  LLKVSD 3
           LLK  D
Sbjct: 521 LLKKCD 526


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Cucumis sativus]
          Length = 626

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/66 (69%), Positives = 54/66 (81%)
 Frame = -3

Query: 200 LNPLKVCLPSIVEEFLRVAKSSCVFAMPENFVPSGLVESELSMAFGGLERLDMFFPFDPY 21
           L+PLKVCLPSIVEEFLR AK + +F   ENF+ +GL+ES+ S +FGGLERLDMFFPFDP 
Sbjct: 461 LSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPC 520

Query: 20  LLKVSD 3
           LLK  D
Sbjct: 521 LLKKCD 526


>ref|XP_002437492.1| hypothetical protein SORBIDRAFT_10g028030 [Sorghum bicolor]
           gi|241915715|gb|EER88859.1| hypothetical protein
           SORBIDRAFT_10g028030 [Sorghum bicolor]
          Length = 593

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/67 (68%), Positives = 50/67 (74%)
 Frame = -3

Query: 203 PLNPLKVCLPSIVEEFLRVAKSSCVFAMPENFVPSGLVESELSMAFGGLERLDMFFPFDP 24
           PL PLKVCLPSIV EFLR A+S+ +F    N      VES+LS AFGGL RLDMFFPFDP
Sbjct: 431 PLEPLKVCLPSIVNEFLRQARSASLFHASVNSTHEDAVESDLSKAFGGLNRLDMFFPFDP 490

Query: 23  YLLKVSD 3
           YLLK SD
Sbjct: 491 YLLKESD 497


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