BLASTX nr result

ID: Cephaelis21_contig00018980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018980
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   110   1e-22
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   107   8e-22
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              107   8e-22
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   105   5e-21
ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic su...    99   3e-19

>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/88 (56%), Positives = 66/88 (75%)
 Frame = +1

Query: 1   QAVRTSGNGKMSCDFSEANQSMNNXXXXXXXXXXXXXXPFYILDAHEEIYGSNVGNLFLF 180
           QA+R +G+G ++C+ SEA + +N               PF+ILDAHEE+YG+N GN++LF
Sbjct: 340 QALRNAGSGILNCNESEA-KLVNTEEKTDFELDSDGSLPFFILDAHEELYGTNAGNIYLF 398

Query: 181 GKVKSGDTYHSCCVVVKNMQRCVYAIPN 264
           GKVK+G TYHSCC+VVKNMQRCVYA+PN
Sbjct: 399 GKVKAGGTYHSCCIVVKNMQRCVYAVPN 426


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
           vinifera]
          Length = 1522

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/88 (57%), Positives = 58/88 (65%)
 Frame = +1

Query: 1   QAVRTSGNGKMSCDFSEANQSMNNXXXXXXXXXXXXXXPFYILDAHEEIYGSNVGNLFLF 180
           QAVR  GN     +    N S+N               PFYILDAHEE YG+N+GNL+LF
Sbjct: 303 QAVRNGGNPSAGYEGEVVNPSLNCEEKADFLLDSDGSLPFYILDAHEEFYGANMGNLYLF 362

Query: 181 GKVKSGDTYHSCCVVVKNMQRCVYAIPN 264
           GKVK+G  YHSCCVVVKNM+RCVYAIPN
Sbjct: 363 GKVKAGSAYHSCCVVVKNMERCVYAIPN 390


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/88 (57%), Positives = 58/88 (65%)
 Frame = +1

Query: 1   QAVRTSGNGKMSCDFSEANQSMNNXXXXXXXXXXXXXXPFYILDAHEEIYGSNVGNLFLF 180
           QAVR  GN     +    N S+N               PFYILDAHEE YG+N+GNL+LF
Sbjct: 304 QAVRNGGNPSAGYEGEVVNPSLNCEEKADFLLDSDGSLPFYILDAHEEFYGANMGNLYLF 363

Query: 181 GKVKSGDTYHSCCVVVKNMQRCVYAIPN 264
           GKVK+G  YHSCCVVVKNM+RCVYAIPN
Sbjct: 364 GKVKAGSAYHSCCVVVKNMERCVYAIPN 391


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
           gi|223537171|gb|EEF38804.1| DNA polymerase alpha
           catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/88 (55%), Positives = 61/88 (69%)
 Frame = +1

Query: 1   QAVRTSGNGKMSCDFSEANQSMNNXXXXXXXXXXXXXXPFYILDAHEEIYGSNVGNLFLF 180
           QAVR+ GNG ++    E    +                PFYI+DAHEEI+G+N+G L+LF
Sbjct: 302 QAVRSGGNGSVAGVTEEVKSGVVCDEQSEFELEADGSLPFYIIDAHEEIFGANMGTLYLF 361

Query: 181 GKVKSGDTYHSCCVVVKNMQRCVYAIPN 264
           GKVK+G+TYHSCC+VVKNMQRCVYAIPN
Sbjct: 362 GKVKAGNTYHSCCMVVKNMQRCVYAIPN 389


>ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
           [Cucumis sativus]
          Length = 498

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/89 (51%), Positives = 62/89 (69%)
 Frame = +1

Query: 1   QAVRTSGNGKMSCDFSEANQSMNNXXXXXXXXXXXXXXPFYILDAHEEIYGSNVGNLFLF 180
           QAVR+ G+G ++     A +                  PFYI+DAHEE++G+N+G ++LF
Sbjct: 333 QAVRSEGSGSVNSAAEMAEEKSE------FDTDTDGSLPFYIVDAHEELFGANMGTVYLF 386

Query: 181 GKVKSGDTYHSCCVVVKNMQRCVYAIPNA 267
           GKVK+GDT+HSCCVVVKNMQRC+YAIP+A
Sbjct: 387 GKVKAGDTFHSCCVVVKNMQRCIYAIPSA 415


Top