BLASTX nr result

ID: Cephaelis21_contig00018934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018934
         (1543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518422.1| 50S ribosomal protein L4, putative [Ricinus ...   441   e-121
ref|XP_003634850.1| PREDICTED: 50S ribosomal protein L4-like [Vi...   426   e-117
emb|CAN77922.1| hypothetical protein VITISV_027648 [Vitis vinifera]   421   e-115
ref|XP_003534682.1| PREDICTED: 50S ribosomal protein L4-like [Gl...   419   e-114
gb|AAM62769.1| 50S ribosomal protein L4 [Arabidopsis thaliana]        418   e-114

>ref|XP_002518422.1| 50S ribosomal protein L4, putative [Ricinus communis]
            gi|223542267|gb|EEF43809.1| 50S ribosomal protein L4,
            putative [Ricinus communis]
          Length = 294

 Score =  441 bits (1135), Expect = e-121
 Identities = 219/259 (84%), Positives = 240/259 (92%)
 Frame = +3

Query: 378  NELSSIAFRRFSTSILTPGSSDDSFPSNLLSRKRVITPERTFGLYQDLVIPVANFSNEDK 557
            N  +S+A R+ STSILTPGSSDD+FPS+LLS K ++TPER  GL++DLVIPV NF NEDK
Sbjct: 36   NGAASLACRKLSTSILTPGSSDDAFPSDLLSTKTLLTPEREIGLHEDLVIPVTNFLNEDK 95

Query: 558  GLMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRAR 737
            G MVLAGDVFDVPI+K IIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKP+RQKGTGRAR
Sbjct: 96   GFMVLAGDVFDVPIKKHIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPYRQKGTGRAR 155

Query: 738  HGTLRGPQFRGGATMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLVVFEDLEVTSH 917
            HGTLRGPQFRGGATMHGPKPRSHAIK NKKVRRLGLKIAL+ARAAEGKL+VFEDLE+ +H
Sbjct: 156  HGTLRGPQFRGGATMHGPKPRSHAIKCNKKVRRLGLKIALTARAAEGKLLVFEDLEIPTH 215

Query: 918  KTKNIVSSYKQMDETKKLLLVDGDEINEKLRLATQNLHYINVLPSIGLNVYSILLHDTLV 1097
            KTKNIV+  KQM+ETKKLLLVDG  INEKL+LA QNLHY+NVLPSIGLNVYSILLHDTLV
Sbjct: 216  KTKNIVNYVKQMEETKKLLLVDGGPINEKLKLAAQNLHYVNVLPSIGLNVYSILLHDTLV 275

Query: 1098 MSRDAVNKIVDRMHTPINR 1154
            MSRDAVN+IV+RMHTPINR
Sbjct: 276  MSRDAVNRIVERMHTPINR 294


>ref|XP_003634850.1| PREDICTED: 50S ribosomal protein L4-like [Vitis vinifera]
            gi|297741766|emb|CBI32995.3| unnamed protein product
            [Vitis vinifera]
          Length = 315

 Score =  426 bits (1095), Expect = e-117
 Identities = 213/248 (85%), Positives = 227/248 (91%)
 Frame = +3

Query: 411  STSILTPGSSDDSFPSNLLSRKRVITPERTFGLYQDLVIPVANFSNEDKGLMVLAGDVFD 590
            +T+ILTP SS  +FP  LLS K V+TPERT G YQDLVIPV NF NEDKG MVLAGDVFD
Sbjct: 68   TTTILTPESSGVAFPPELLSTKTVLTPERTPGHYQDLVIPVTNFHNEDKGFMVLAGDVFD 127

Query: 591  VPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRG 770
            VPIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTG+KPWRQKGTGRARHGTLRGPQFRG
Sbjct: 128  VPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRG 187

Query: 771  GATMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLVVFEDLEVTSHKTKNIVSSYKQ 950
            GA MHGPKPRSHAIKLNKKVRRLGLKIALSAR AEGKL+VF+DLEV SHKTKNIV+  K+
Sbjct: 188  GAIMHGPKPRSHAIKLNKKVRRLGLKIALSARTAEGKLLVFDDLEVPSHKTKNIVNYVKE 247

Query: 951  MDETKKLLLVDGDEINEKLRLATQNLHYINVLPSIGLNVYSILLHDTLVMSRDAVNKIVD 1130
            M+ TKKLLLVDG  I EKL+LATQNLHY+NVLPSIGLNVYSILLHDTLVMSRDAVNKIV+
Sbjct: 248  MENTKKLLLVDGGPITEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNKIVE 307

Query: 1131 RMHTPINR 1154
            RMHTPINR
Sbjct: 308  RMHTPINR 315


>emb|CAN77922.1| hypothetical protein VITISV_027648 [Vitis vinifera]
          Length = 278

 Score =  421 bits (1082), Expect = e-115
 Identities = 210/248 (84%), Positives = 225/248 (90%)
 Frame = +3

Query: 411  STSILTPGSSDDSFPSNLLSRKRVITPERTFGLYQDLVIPVANFSNEDKGLMVLAGDVFD 590
            +T++LTP SS  +FP  LLS K V+TPERT G YQDLVIPV NF NEDKG M LAGDVFD
Sbjct: 31   TTTMLTPESSGVAFPPELLSTKTVLTPERTPGHYQDLVIPVTNFHNEDKGFMXLAGDVFD 90

Query: 591  VPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRG 770
            VPIRKDI+HRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRG
Sbjct: 91   VPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQFRG 150

Query: 771  GATMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLVVFEDLEVTSHKTKNIVSSYKQ 950
            GA MHGPKPRSHAIKLNKKVRRLGLKIALSAR AEGKL+VF+DLEV SHKTKNIV+  K+
Sbjct: 151  GAIMHGPKPRSHAIKLNKKVRRLGLKIALSARTAEGKLLVFDDLEVPSHKTKNIVNYVKE 210

Query: 951  MDETKKLLLVDGDEINEKLRLATQNLHYINVLPSIGLNVYSILLHDTLVMSRDAVNKIVD 1130
            M+  KKLLLVDG  I EKL+LATQNLHY+NVLPSIGLNVYSILLHDTLVMSR+AVNKIV+
Sbjct: 211  MENXKKLLLVDGGPITEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRBAVNKIVE 270

Query: 1131 RMHTPINR 1154
            RMHTPINR
Sbjct: 271  RMHTPINR 278


>ref|XP_003534682.1| PREDICTED: 50S ribosomal protein L4-like [Glycine max]
          Length = 310

 Score =  419 bits (1077), Expect = e-114
 Identities = 209/251 (83%), Positives = 230/251 (91%)
 Frame = +3

Query: 402  RRFSTSILTPGSSDDSFPSNLLSRKRVITPERTFGLYQDLVIPVANFSNEDKGLMVLAGD 581
            R+FSTSILTPG  D +FPS+LLS+K + T ERT GL QDL+IPV NF NEDKG MVL GD
Sbjct: 61   RQFSTSILTPGDDDSAFPSDLLSKKILATSERTIGLCQDLLIPVTNFHNEDKGYMVLPGD 120

Query: 582  VFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHGTLRGPQ 761
            VFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTG+KPW QKGTGRARHG+LRGPQ
Sbjct: 121  VFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGSLRGPQ 180

Query: 762  FRGGATMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLVVFEDLEVTSHKTKNIVSS 941
            FRGGATMHGPKPRSHA K+NKKVRRLGLKIALSARAAEGKL+VFEDL V +HKTKNIV+ 
Sbjct: 181  FRGGATMHGPKPRSHAFKVNKKVRRLGLKIALSARAAEGKLLVFEDLAVPTHKTKNIVNY 240

Query: 942  YKQMDETKKLLLVDGDEINEKLRLATQNLHYINVLPSIGLNVYSILLHDTLVMSRDAVNK 1121
            Y QM++TKKLLLVDG  I+EKL+L+TQNLHY+NVLPSIGLNVYSILLHDTLVMSR AV+K
Sbjct: 241  YNQMEDTKKLLLVDG-AIDEKLKLSTQNLHYVNVLPSIGLNVYSILLHDTLVMSRAAVSK 299

Query: 1122 IVDRMHTPINR 1154
            IV+RMHTPINR
Sbjct: 300  IVERMHTPINR 310


>gb|AAM62769.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
          Length = 300

 Score =  418 bits (1075), Expect = e-114
 Identities = 203/257 (78%), Positives = 234/257 (91%)
 Frame = +3

Query: 384  LSSIAFRRFSTSILTPGSSDDSFPSNLLSRKRVITPERTFGLYQDLVIPVANFSNEDKGL 563
            ++ ++ R+ STSILTP   DDSFPS+LL++K V+TP+RT G YQDLVIPV NF NE+KG 
Sbjct: 47   MALLSNRKLSTSILTP---DDSFPSDLLTKKTVLTPDRTIGQYQDLVIPVTNFQNEEKGF 103

Query: 564  MVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARHG 743
            MVLAGDVFDVPIRKDIIH VVRWQLAKRQQGTHSTKT+SEVSGTG+KPW QKGTGRARHG
Sbjct: 104  MVLAGDVFDVPIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTGRARHG 163

Query: 744  TLRGPQFRGGATMHGPKPRSHAIKLNKKVRRLGLKIALSARAAEGKLVVFEDLEVTSHKT 923
            TLRGPQFRGG  MHGPKPRSHAIK+NK+VRRLGLKIAL+ARAAEGKL+VF+DL + +HKT
Sbjct: 164  TLRGPQFRGGCVMHGPKPRSHAIKMNKQVRRLGLKIALTARAAEGKLLVFDDLGLPTHKT 223

Query: 924  KNIVSSYKQMDETKKLLLVDGDEINEKLRLATQNLHYINVLPSIGLNVYSILLHDTLVMS 1103
            KNIV+ Y QM+ TKK+L+V+G  I+EKL+LATQNLHY+N++PSIGLNVYSILLHDTLVMS
Sbjct: 224  KNIVNYYNQMENTKKVLVVEGGPIDEKLKLATQNLHYVNIIPSIGLNVYSILLHDTLVMS 283

Query: 1104 RDAVNKIVDRMHTPINR 1154
            RDAVNKIV+RMHTPINR
Sbjct: 284  RDAVNKIVERMHTPINR 300


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