BLASTX nr result

ID: Cephaelis21_contig00018679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018679
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170068.1| PREDICTED: sister chromatid cohesion protein...   125   3e-27
ref|XP_004139601.1| PREDICTED: sister chromatid cohesion protein...   122   2e-26
ref|XP_002865107.1| binding protein [Arabidopsis lyrata subsp. l...   122   3e-26
ref|NP_001119390.1| sister chromatid cohesion protein PDS5 [Arab...   122   3e-26
ref|NP_001119389.1| sister chromatid cohesion protein PDS5 [Arab...   122   3e-26

>ref|XP_004170068.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like,
           partial [Cucumis sativus]
          Length = 1014

 Score =  125 bits (315), Expect = 3e-27
 Identities = 64/98 (65%), Positives = 78/98 (79%)
 Frame = -2

Query: 294 DGDANEIQKKVMFSFRMMSRCFSDHAKTEENFQILDQLKDSNVWQILKILLDPITTTTTS 115
           +GDA E QKK++FSFR+MSR F+D AK+EENFQILDQLKD+NVW+IL  L+DP   T   
Sbjct: 164 EGDAPETQKKILFSFRVMSRSFADPAKSEENFQILDQLKDANVWRILSNLIDP--NTNFH 221

Query: 114 HASNLRDDLLRILVEKHRLFEFLSILSLKC*NLLFGKE 1
            A NLRD+LL+IL EKHRL++FL  LS+KC  LLF KE
Sbjct: 222 QACNLRDELLKILGEKHRLYDFLDSLSVKCSYLLFNKE 259


>ref|XP_004139601.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Cucumis sativus]
          Length = 1692

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/96 (65%), Positives = 76/96 (79%)
 Frame = -2

Query: 288 DANEIQKKVMFSFRMMSRCFSDHAKTEENFQILDQLKDSNVWQILKILLDPITTTTTSHA 109
           DA E QKK++FSFR+MSR F+D AK+EENFQILDQLKD+NVW+IL  L+DP   T    A
Sbjct: 514 DAPETQKKILFSFRVMSRSFADPAKSEENFQILDQLKDANVWRILSNLIDP--NTNFHQA 571

Query: 108 SNLRDDLLRILVEKHRLFEFLSILSLKC*NLLFGKE 1
            NLRD+LL+IL EKHRL++FL  LS+KC  LLF KE
Sbjct: 572 CNLRDELLKILGEKHRLYDFLDSLSVKCSYLLFNKE 607


>ref|XP_002865107.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310942|gb|EFH41366.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1608

 Score =  122 bits (306), Expect = 3e-26
 Identities = 62/96 (64%), Positives = 75/96 (78%)
 Frame = -2

Query: 288 DANEIQKKVMFSFRMMSRCFSDHAKTEENFQILDQLKDSNVWQILKILLDPITTTTTSHA 109
           DA EIQKK++F FR+MSR FSD  KTE+NF ILDQLKD+N+W+IL  LLDP   T+   A
Sbjct: 514 DAPEIQKKILFGFRVMSRAFSDPPKTEQNFLILDQLKDANIWKILTNLLDP--NTSIMQA 571

Query: 108 SNLRDDLLRILVEKHRLFEFLSILSLKC*NLLFGKE 1
           S +RDD+L+IL EKH L+EFLS LS+KC  LLF KE
Sbjct: 572 SRIRDDMLKILSEKHSLYEFLSTLSIKCSYLLFSKE 607


>ref|NP_001119390.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana]
           gi|332008170|gb|AED95553.1| sister chromatid cohesion
           protein PDS5 [Arabidopsis thaliana]
          Length = 1607

 Score =  122 bits (306), Expect = 3e-26
 Identities = 62/96 (64%), Positives = 76/96 (79%)
 Frame = -2

Query: 288 DANEIQKKVMFSFRMMSRCFSDHAKTEENFQILDQLKDSNVWQILKILLDPITTTTTSHA 109
           DA EIQKK++F FR+MSR FSD  KTE+NF ILDQLKD+N+W+IL  LLDP T+ T   A
Sbjct: 514 DAPEIQKKILFGFRVMSRAFSDPPKTEQNFLILDQLKDANIWKILTNLLDPNTSIT--QA 571

Query: 108 SNLRDDLLRILVEKHRLFEFLSILSLKC*NLLFGKE 1
           S +RDD+L+IL EKH L++FLS LS+KC  LLF KE
Sbjct: 572 SRIRDDMLKILSEKHSLYDFLSTLSIKCSYLLFSKE 607


>ref|NP_001119389.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana]
           gi|332008169|gb|AED95552.1| sister chromatid cohesion
           protein PDS5 [Arabidopsis thaliana]
          Length = 1606

 Score =  122 bits (306), Expect = 3e-26
 Identities = 62/96 (64%), Positives = 76/96 (79%)
 Frame = -2

Query: 288 DANEIQKKVMFSFRMMSRCFSDHAKTEENFQILDQLKDSNVWQILKILLDPITTTTTSHA 109
           DA EIQKK++F FR+MSR FSD  KTE+NF ILDQLKD+N+W+IL  LLDP T+ T   A
Sbjct: 514 DAPEIQKKILFGFRVMSRAFSDPPKTEQNFLILDQLKDANIWKILTNLLDPNTSIT--QA 571

Query: 108 SNLRDDLLRILVEKHRLFEFLSILSLKC*NLLFGKE 1
           S +RDD+L+IL EKH L++FLS LS+KC  LLF KE
Sbjct: 572 SRIRDDMLKILSEKHSLYDFLSTLSIKCSYLLFSKE 607


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