BLASTX nr result

ID: Cephaelis21_contig00018673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018673
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147741.1| PREDICTED: serine hydroxymethyltransferase, ...   390   e-106
gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus ...   385   e-105
ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus t...   384   e-104
ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, ...   384   e-104
ref|NP_567895.1| serine hydroxymethyltransferase 3 [Arabidopsis ...   379   e-103

>ref|XP_004147741.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
            [Cucumis sativus] gi|449519543|ref|XP_004166794.1|
            PREDICTED: serine hydroxymethyltransferase,
            mitochondrial-like [Cucumis sativus]
          Length = 528

 Score =  390 bits (1003), Expect = e-106
 Identities = 189/232 (81%), Positives = 210/232 (90%)
 Frame = -3

Query: 1057 VADPFEHCDIVTTTTHKSLRGPRGGMIFFKKDPVLGVDLESAINNAVFPGLQGGPHNHTI 878
            VADPFE+CDIVTTTTHKSLRGPRGGMIFF+KDPVLGVDLESAINNAVFPGLQGGPHNHTI
Sbjct: 297  VADPFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTI 356

Query: 877  AALAVSLKLAQLPEFKTYQNQVVSNCRALADRLIGFGYKLVSGGTDNHLILVDLRPLGID 698
              LAV LK AQ PEFK YQN+V++NCRALA+RL+  GYKLVSGG+DNHL+LVDLRPLGID
Sbjct: 357  GGLAVCLKHAQSPEFKVYQNKVIANCRALANRLVELGYKLVSGGSDNHLVLVDLRPLGID 416

Query: 697  GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGTPSMTTRGFTEKDIVLAADFIHEGV 518
            GARVEKILDMASITLNKNSVPGDKSALVPGGIRIG+P+MTTRGFTEK+ V  ADFIHEGV
Sbjct: 417  GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGV 476

Query: 517  QIALEAKKAAPGSKVQDFMNFVGSPDFPFAQRVLDLRERVEALTTKFPLPGL 362
            +I L+AK  APGSK+Q+F+ FV + DFP   R+ DLR RVEALTT+FP+PGL
Sbjct: 477  KITLDAKPLAPGSKLQEFLKFVTTSDFPLTDRISDLRSRVEALTTQFPIPGL 528


>gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus tremuloides]
          Length = 529

 Score =  385 bits (990), Expect = e-105
 Identities = 187/232 (80%), Positives = 208/232 (89%)
 Frame = -3

Query: 1057 VADPFEHCDIVTTTTHKSLRGPRGGMIFFKKDPVLGVDLESAINNAVFPGLQGGPHNHTI 878
            VADPFE+CD+VTTTTHKSLRGPRGGMIFFKKDPVLGVD+ESAINNAVFPGLQGGPHNHTI
Sbjct: 298  VADPFEYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVDMESAINNAVFPGLQGGPHNHTI 357

Query: 877  AALAVSLKLAQLPEFKTYQNQVVSNCRALADRLIGFGYKLVSGGTDNHLILVDLRPLGID 698
              LAV LK AQ PEFK YQ QV+ N RALA+R++  GYKLVSGG+DNHLILVDLRPLG+D
Sbjct: 358  GGLAVCLKHAQSPEFKAYQKQVICNSRALANRMVELGYKLVSGGSDNHLILVDLRPLGLD 417

Query: 697  GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGTPSMTTRGFTEKDIVLAADFIHEGV 518
            GARVEKILD+ASITLNKNSVPGDKSALVPGGIRIG+P+MTTRGFTE++ V  AD IHEGV
Sbjct: 418  GARVEKILDIASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFVATADLIHEGV 477

Query: 517  QIALEAKKAAPGSKVQDFMNFVGSPDFPFAQRVLDLRERVEALTTKFPLPGL 362
            QI+LEAKK+  GSK+QDF+ FV SPDFP   +V DLR RVEALTT+FP+PGL
Sbjct: 478  QISLEAKKSVSGSKLQDFLKFVKSPDFPLTDKVSDLRRRVEALTTQFPIPGL 529


>ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus trichocarpa]
            gi|222855489|gb|EEE93036.1| serine
            hydroxymethyltransferase 8 [Populus trichocarpa]
          Length = 529

 Score =  384 bits (987), Expect = e-104
 Identities = 187/232 (80%), Positives = 207/232 (89%)
 Frame = -3

Query: 1057 VADPFEHCDIVTTTTHKSLRGPRGGMIFFKKDPVLGVDLESAINNAVFPGLQGGPHNHTI 878
            VADPFE+CD+VTTTTHKSLRGPRGGMIFFKKDPVLGVD+ESAINNAVFPGLQGGPHNHTI
Sbjct: 298  VADPFEYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVDMESAINNAVFPGLQGGPHNHTI 357

Query: 877  AALAVSLKLAQLPEFKTYQNQVVSNCRALADRLIGFGYKLVSGGTDNHLILVDLRPLGID 698
              LAV LK AQ PEFK YQ QV+ N RALA+R++  GYKLVSGG+DNHLILVDLRPLG+D
Sbjct: 358  GGLAVCLKHAQSPEFKAYQKQVICNSRALANRMVELGYKLVSGGSDNHLILVDLRPLGLD 417

Query: 697  GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGTPSMTTRGFTEKDIVLAADFIHEGV 518
            GARVEKILDMASITLNKNSVPGDKSALVPGGIRIG+P+MTTRGFTE + V  AD IHEGV
Sbjct: 418  GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTETEFVATADLIHEGV 477

Query: 517  QIALEAKKAAPGSKVQDFMNFVGSPDFPFAQRVLDLRERVEALTTKFPLPGL 362
            QI+LEAKK+  GSK+QDF+ FV SPDFP   +V DL+ RVEALTT+FP+PGL
Sbjct: 478  QISLEAKKSVSGSKLQDFLKFVKSPDFPLTDKVSDLQRRVEALTTQFPIPGL 529


>ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Vitis
            vinifera] gi|296081614|emb|CBI20619.3| unnamed protein
            product [Vitis vinifera]
          Length = 528

 Score =  384 bits (986), Expect = e-104
 Identities = 190/232 (81%), Positives = 205/232 (88%)
 Frame = -3

Query: 1057 VADPFEHCDIVTTTTHKSLRGPRGGMIFFKKDPVLGVDLESAINNAVFPGLQGGPHNHTI 878
            VADPFE+CDIVTTTTHKSLRGPRGGMIFFKKD VLGVDLESAINNAVFPGLQGGPHNHTI
Sbjct: 297  VADPFEYCDIVTTTTHKSLRGPRGGMIFFKKDSVLGVDLESAINNAVFPGLQGGPHNHTI 356

Query: 877  AALAVSLKLAQLPEFKTYQNQVVSNCRALADRLIGFGYKLVSGGTDNHLILVDLRPLGID 698
              L+V LK AQ PEFK YQNQVVSNCRALA RLI  GY LVSGG+DNHLILVDLRPLGID
Sbjct: 357  GGLSVCLKHAQSPEFKAYQNQVVSNCRALAGRLIELGYNLVSGGSDNHLILVDLRPLGID 416

Query: 697  GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGTPSMTTRGFTEKDIVLAADFIHEGV 518
            GAR EKILDMASITLNKNSVPGDKSALVPGGIRIG+P+MTTRGF+EK+ +  ADFIHEGV
Sbjct: 417  GARAEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFIATADFIHEGV 476

Query: 517  QIALEAKKAAPGSKVQDFMNFVGSPDFPFAQRVLDLRERVEALTTKFPLPGL 362
            Q++LEAKK+  GSK+ DFM FV SPDF    RV DL+ RVE LTT+FP+PGL
Sbjct: 477  QLSLEAKKSVSGSKLLDFMKFVTSPDFSLIDRVSDLQRRVETLTTQFPMPGL 528


>ref|NP_567895.1| serine hydroxymethyltransferase 3 [Arabidopsis thaliana]
            gi|186515561|ref|NP_001119098.1| serine
            hydroxymethyltransferase 3 [Arabidopsis thaliana]
            gi|332660671|gb|AEE86071.1| serine
            hydroxymethyltransferase 3 [Arabidopsis thaliana]
            gi|332660672|gb|AEE86072.1| serine
            hydroxymethyltransferase 3 [Arabidopsis thaliana]
          Length = 529

 Score =  379 bits (974), Expect = e-103
 Identities = 182/232 (78%), Positives = 208/232 (89%)
 Frame = -3

Query: 1057 VADPFEHCDIVTTTTHKSLRGPRGGMIFFKKDPVLGVDLESAINNAVFPGLQGGPHNHTI 878
            VADPFE+CDIVTTTTHKSLRGPRGGMIFF+KDP+ GVDLESA+NNAVFPGLQGGPHNHTI
Sbjct: 298  VADPFEYCDIVTTTTHKSLRGPRGGMIFFRKDPINGVDLESAVNNAVFPGLQGGPHNHTI 357

Query: 877  AALAVSLKLAQLPEFKTYQNQVVSNCRALADRLIGFGYKLVSGGTDNHLILVDLRPLGID 698
              LAV LK AQ PEFK YQ +VVSNCRALA+RL+  G+KLVSGG+DNHL+LVDLRP+G+D
Sbjct: 358  GGLAVCLKHAQSPEFKAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMD 417

Query: 697  GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGTPSMTTRGFTEKDIVLAADFIHEGV 518
            GARVEKILDMASITLNKNSVPGDKSALVPGGIRIG+P+MTTRG +EKD V+ ADFI EGV
Sbjct: 418  GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGV 477

Query: 517  QIALEAKKAAPGSKVQDFMNFVGSPDFPFAQRVLDLRERVEALTTKFPLPGL 362
            +I +EAKKAAPGSK+QDF  FV SP+FP  +RV  L+ERVE  T++FP+PG+
Sbjct: 478  EITMEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLKERVETFTSRFPIPGV 529


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