BLASTX nr result

ID: Cephaelis21_contig00018670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018670
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304418.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-12
emb|CBI31917.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_003608723.1| DEAD-box ATP-dependent RNA helicase [Medicag...    61   1e-07
ref|XP_004152431.1| PREDICTED: uncharacterized protein LOC101212...    58   9e-07
ref|XP_003525566.1| PREDICTED: uncharacterized protein LOC100814...    57   2e-06

>ref|XP_002304418.1| predicted protein [Populus trichocarpa] gi|222841850|gb|EEE79397.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score = 71.2 bits (173), Expect(2) = 1e-12
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = +1

Query: 10  SDSTTEVDRVKSRTEQRFPLPGEPTCVVCGKYGEYICDE 126
           SD   EVDRVKSR+EQR+P+PGEP C++CGKYGEYIC+E
Sbjct: 113 SDHPNEVDRVKSRSEQRYPVPGEPVCLLCGKYGEYICNE 151



 Score = 26.2 bits (56), Expect(2) = 1e-12
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = +3

Query: 129 LGVPDFTRDTWNFDNNCWS-KIQKIVCWVVWLPQN----SEDC 242
           L +P    DTW+++ + WS KI  +  +  W  Q      EDC
Sbjct: 192 LPMPLLGEDTWDYNRHRWSKKISNLCAYECWKCQRPGHLPEDC 234


>emb|CBI31917.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 29/42 (69%), Positives = 32/42 (76%)
 Frame = +1

Query: 1   PSTSDSTTEVDRVKSRTEQRFPLPGEPTCVVCGKYGEYICDE 126
           P       EV++VKSR EQRFPLPGEP CVVCG YGEYIC+E
Sbjct: 132 PPNPGHINEVEQVKSRREQRFPLPGEPVCVVCGLYGEYICNE 173


>ref|XP_003608723.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355509778|gb|AES90920.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 452

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 23/42 (54%), Positives = 32/42 (76%)
 Frame = +1

Query: 1   PSTSDSTTEVDRVKSRTEQRFPLPGEPTCVVCGKYGEYICDE 126
           P++      ++ VKSR EQRFP+ GEP C++CG+YGEYIC+E
Sbjct: 139 PNSGHKEESINGVKSRNEQRFPVSGEPVCLICGRYGEYICNE 180


>ref|XP_004152431.1| PREDICTED: uncharacterized protein LOC101212105 [Cucumis sativus]
           gi|449513293|ref|XP_004164287.1| PREDICTED:
           uncharacterized protein LOC101227135 [Cucumis sativus]
          Length = 443

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/39 (61%), Positives = 29/39 (74%)
 Frame = +1

Query: 10  SDSTTEVDRVKSRTEQRFPLPGEPTCVVCGKYGEYICDE 126
           S    +   V+S+TEQRF + GEP CVVCG+YGEYICDE
Sbjct: 140 SSLLNDYKEVESKTEQRFAVAGEPVCVVCGRYGEYICDE 178


>ref|XP_003525566.1| PREDICTED: uncharacterized protein LOC100814892 [Glycine max]
          Length = 446

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/40 (62%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
 Frame = +1

Query: 10  SDSTTEVDRVK-SRTEQRFPLPGEPTCVVCGKYGEYICDE 126
           S    E D VK SR EQRFP+ GEP C++CG+YGEYIC+E
Sbjct: 150 SGQQEEFDGVKKSRNEQRFPVSGEPVCLICGRYGEYICNE 189


Top