BLASTX nr result

ID: Cephaelis21_contig00018647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018647
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306584.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_002513888.1| splicing endonuclease positive effector sen1...   132   3e-29
ref|XP_003547681.1| PREDICTED: uncharacterized ATP-dependent hel...   128   4e-28
ref|XP_003529830.1| PREDICTED: probable helicase senataxin-like ...   128   4e-28
ref|XP_003627257.1| Helicase sen1 [Medicago truncatula] gi|35552...   128   5e-28

>ref|XP_002306584.1| predicted protein [Populus trichocarpa] gi|222856033|gb|EEE93580.1|
           predicted protein [Populus trichocarpa]
          Length = 1147

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/72 (87%), Positives = 67/72 (93%)
 Frame = -2

Query: 216 SKPDDDHILRKLQPRGIWYLTVLGSLATT*REYVALHAFCRLNLQMQNAILQPSPDHFPK 37
           SK D+DHILRKLQPRG W+LTVLGSLATT REYVALHAFCRLNLQMQ AIL+PS DHFPK
Sbjct: 377 SKVDEDHILRKLQPRGTWFLTVLGSLATTQREYVALHAFCRLNLQMQAAILKPSSDHFPK 436

Query: 36  YEEQTPAMPECF 1
           YE+QTPAMPECF
Sbjct: 437 YEQQTPAMPECF 448


>ref|XP_002513888.1| splicing endonuclease positive effector sen1, putative [Ricinus
           communis] gi|223546974|gb|EEF48471.1| splicing
           endonuclease positive effector sen1, putative [Ricinus
           communis]
          Length = 1352

 Score =  132 bits (332), Expect = 3e-29
 Identities = 61/72 (84%), Positives = 66/72 (91%)
 Frame = -2

Query: 216 SKPDDDHILRKLQPRGIWYLTVLGSLATT*REYVALHAFCRLNLQMQNAILQPSPDHFPK 37
           SK D+DHILRKLQPRG W+LTVLGSLATT REYVALHAFCRLN QMQ AIL+PSP+HFPK
Sbjct: 582 SKGDEDHILRKLQPRGTWFLTVLGSLATTQREYVALHAFCRLNSQMQTAILKPSPEHFPK 641

Query: 36  YEEQTPAMPECF 1
           YE+Q PAMPECF
Sbjct: 642 YEQQIPAMPECF 653


>ref|XP_003547681.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
           [Glycine max]
          Length = 1328

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/72 (83%), Positives = 65/72 (90%)
 Frame = -2

Query: 216 SKPDDDHILRKLQPRGIWYLTVLGSLATT*REYVALHAFCRLNLQMQNAILQPSPDHFPK 37
           S+ DDDHI+RKLQ   IWYLTVLGSLATT REY+ALHAF RLNLQMQ AILQPSP+HFPK
Sbjct: 553 SRVDDDHIIRKLQAGSIWYLTVLGSLATTQREYIALHAFRRLNLQMQTAILQPSPEHFPK 612

Query: 36  YEEQTPAMPECF 1
           YE+QTPAMPECF
Sbjct: 613 YEQQTPAMPECF 624


>ref|XP_003529830.1| PREDICTED: probable helicase senataxin-like [Glycine max]
          Length = 1388

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/72 (83%), Positives = 65/72 (90%)
 Frame = -2

Query: 216 SKPDDDHILRKLQPRGIWYLTVLGSLATT*REYVALHAFCRLNLQMQNAILQPSPDHFPK 37
           S+ DDDHI+RKLQ   IWYLTVLGSLATT REY+ALHAF RLNLQMQ AILQPSP+HFPK
Sbjct: 587 SRVDDDHIIRKLQAGSIWYLTVLGSLATTQREYIALHAFRRLNLQMQTAILQPSPEHFPK 646

Query: 36  YEEQTPAMPECF 1
           YE+QTPAMPECF
Sbjct: 647 YEQQTPAMPECF 658


>ref|XP_003627257.1| Helicase sen1 [Medicago truncatula] gi|355521279|gb|AET01733.1|
           Helicase sen1 [Medicago truncatula]
          Length = 1516

 Score =  128 bits (321), Expect = 5e-28
 Identities = 60/72 (83%), Positives = 66/72 (91%)
 Frame = -2

Query: 216 SKPDDDHILRKLQPRGIWYLTVLGSLATT*REYVALHAFCRLNLQMQNAILQPSPDHFPK 37
           S+ DDDHI+RKLQ   IWYLTVLGSLATT REYVALHAF RLN+QMQ+AILQPSP+HFPK
Sbjct: 672 SRGDDDHIVRKLQTGSIWYLTVLGSLATTQREYVALHAFRRLNMQMQSAILQPSPEHFPK 731

Query: 36  YEEQTPAMPECF 1
           YE+QTPAMPECF
Sbjct: 732 YEQQTPAMPECF 743


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