BLASTX nr result

ID: Cephaelis21_contig00018622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018622
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...    69   1e-09

>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 52/142 (36%), Positives = 77/142 (54%), Gaps = 2/142 (1%)
 Frame = -3

Query: 910 VILSILDSAGSDSENVICGIIKSKLKLYPAINKVKGTKCCCSAAISVVNTQKDSVDQLNE 731
           VILSIL ++GS +  ++  IIKSK+KLY A+++VK      +  + +  T   S     +
Sbjct: 168 VILSILGNSGSGT--LLSEIIKSKVKLYAALHRVKDPSYIHTGILPIGLT---SGIPPCK 222

Query: 730 RKENEVISSIVNLPSTSISES-SCELANIRAAHLPLRQFKKPNPETTVEVVTPPIEFVPP 554
            KE EV      L  T++S   S +L ++   H P+ + +KP P  + EV+ PPI FVP 
Sbjct: 223 GKEVEVAPGTDQLLPTAVSVPLSGQLVHVPVTHPPVHELEKPKPNVSSEVIAPPISFVPS 282

Query: 553 GSEQAMVAS-TFGAKRT*NQKE 491
             EQ +V S T G KR    K+
Sbjct: 283 VFEQPLVVSPTTGRKRNRKNKK 304


Top