BLASTX nr result

ID: Cephaelis21_contig00018615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018615
         (1065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    57   6e-06
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    57   8e-06
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    57   8e-06

>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 4/172 (2%)
 Frame = +3

Query: 528  WNVRGIGXXXXXXXXXXXXXXXXXXFIILFEPMVNSNKLDEVRNKLGFSGALS----NSS 695
            WN RG+G                  FI L E +V+S +++++++KLGF GA         
Sbjct: 312  WNCRGLGNPRTVLALCEINKSRKPDFIFLIETLVHSAQVEKLKSKLGFEGAFCVDRVGRG 371

Query: 696  NKIWASFRHGYTMHQRDSSDQFLHLEVTDPSGVFLAFVATVYGKSTRLEWANLWADLSRL 875
              +   +R          S   + +EV++  G+    V   YG   R +    W  L  L
Sbjct: 372  GGLAFLWRKAGMFSLLXYSQSHIDMEVSEEDGLQWR-VTGFYGFPDRSQRHLSWNLLRSL 430

Query: 876  HNTYSHVPWLVGGDFNVIA*VEEYMGRSSPELGPIQDFQQAIDGCQLLDLPL 1031
            ++  S +PW   GDFN I   EE  G        I+ F  A+  CQL DL L
Sbjct: 431  YSA-SSLPWCCLGDFNDIVCNEEKRGSVPHPPWLIRGFCAALSDCQLQDLXL 481


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1557

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 8/177 (4%)
 Frame = +3

Query: 528  WNVRGIGXXXXXXXXXXXXXXXXXXFIILFEPMVNSNKLDEVRNKLGFSGALSNSSNKI- 704
            WN RGIG                  F+ L E     +K+  +RN+LG  G    SS+ + 
Sbjct: 439  WNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVSSDGMS 498

Query: 705  ------WASFRHGYTMHQRDSS-DQFLHLEVTDPSGVFLAFVATVYGKSTRLEWANLWAD 863
                  W    H   +++ +   D ++ L   DP    L     VYG+        +W+ 
Sbjct: 499  GGLALFWHESVHVEILNKNERFIDAYIRLSPNDP----LWHATFVYGEPRVENRHKMWSL 554

Query: 864  LSRLHNTYSHVPWLVGGDFNVIA*VEEYMGRSSPELGPIQDFQQAIDGCQLLDLPLT 1034
            L+ +  + S++ WLV GDFN      E+  R       +Q F+  +D C+L DL ++
Sbjct: 555  LNSIKQS-SNLSWLVIGDFNEALWQFEHFSRKPRSDAQMQAFRDVLDTCELHDLGIS 610


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1585

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 8/177 (4%)
 Frame = +3

Query: 528  WNVRGIGXXXXXXXXXXXXXXXXXXFIILFEPMVNSNKLDEVRNKLGFSGALSNSSNKI- 704
            WN RGIG                  F+ L E     +K+  +RN+LG  G    SS+ + 
Sbjct: 467  WNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVSSDGMS 526

Query: 705  ------WASFRHGYTMHQRDSS-DQFLHLEVTDPSGVFLAFVATVYGKSTRLEWANLWAD 863
                  W    H   +++ +   D ++ L   DP    L     VYG+        +W+ 
Sbjct: 527  GGLALFWHESVHVEILNKNERFIDAYIRLSPNDP----LWHATFVYGEPRVENRHKMWSL 582

Query: 864  LSRLHNTYSHVPWLVGGDFNVIA*VEEYMGRSSPELGPIQDFQQAIDGCQLLDLPLT 1034
            L+ +  + S++ WLV GDFN      E+  R       +Q F+  +D C+L DL ++
Sbjct: 583  LNSIKQS-SNLSWLVIGDFNEALWQFEHFSRKPRSDAQMQAFRDVLDTCELHDLGIS 638


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