BLASTX nr result

ID: Cephaelis21_contig00018591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018591
         (1119 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]          75   9e-12
emb|CAN60702.1| hypothetical protein VITISV_015869 [Vitis vinifera]    59   9e-10
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]    60   9e-10
emb|CAN77614.1| hypothetical protein VITISV_035196 [Vitis vinifera]    59   9e-10
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    57   1e-09

>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score = 75.1 bits (183), Expect(2) = 9e-12
 Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
 Frame = -2

Query: 341 KIFSNFIWGISEYGKRFHWRRWSELCFPVEEGGVGFYNLSDIVKALNCKL-W*RFRCQNS 165
           K+  NF WG    G + HWR W +LC     GG+GF  L +  +A+  K  W      NS
Sbjct: 60  KMMCNFYWGGDRNGSKMHWRSWEKLCRSKRNGGLGFRRLKNFNRAMLAKQGWRLLTLPNS 119

Query: 164 LWAFFFLKQKYVGDSHPNEIILNPGSSHTWKHLMAVKNFMERNIVWDIVDGET 6
           L A   L+ KY     P EI  +P SS+TW+ ++     +++ I W I  G T
Sbjct: 120 L-AATILRAKYYPRKSPLEISSSPYSSYTWRSILKGSQLLQKGIEWRIGQGNT 171



 Score = 21.9 bits (45), Expect(2) = 9e-12
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -3

Query: 436 GQIVLLKSVLMGFPIHLFAVRHPPKGVLDEL*K 338
           G+ +++KSVL     ++      P+G  D + K
Sbjct: 28  GREIMIKSVLQSISTYIMGCFELPEGTCDRIEK 60


>emb|CAN60702.1| hypothetical protein VITISV_015869 [Vitis vinifera]
          Length = 3028

 Score = 59.3 bits (142), Expect(2) = 9e-10
 Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
 Frame = -2

Query: 953  FSVLINGGPFDFFPCSRGFRHGEPLFPVMFILSSEILSRMLNSLI---LNSNCKTFATPN 783
            FSVLING P  +F  SRG R G+PL P +F++  E LSR++N  +     S C+      
Sbjct: 2479 FSVLINGTPEGYFNSSRGLRQGDPLSPYLFVIGMEALSRLINRAVGGGFLSGCRVDGRGG 2538

Query: 782  RHNPITHLTNADNFLIF 732
                ++HL  AD+ L+F
Sbjct: 2539 NGVLVSHLLFADDTLVF 2555



 Score = 30.8 bits (68), Expect(2) = 9e-10
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 1030 FLIFVMRKIDFGETWFDMV-WRLITAIFQFL 941
            FLIFV++ + FGE W   + W + TA F  L
Sbjct: 2452 FLIFVLQSMGFGEKWIGWISWCISTATFSVL 2482


>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
          Length = 1848

 Score = 60.5 bits (145), Expect(2) = 9e-10
 Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
 Frame = -2

Query: 956  NFSVLINGGPFDFFPCSRGFRHGEPLFPVMFILSSEILSRMLNSLILN---SNCKTFATP 786
            +FSVLING P  FF  SRG R G+PL P +F++  E+ S  LN  + N   S C+     
Sbjct: 1251 SFSVLINGTPKGFFQSSRGLRQGDPLSPYLFVIXMEVFSSFLNRAVDNGYISGCQVKGRN 1310

Query: 785  NRHNPITHLTNADNFLIF 732
                 I+HL  AD+ L+F
Sbjct: 1311 EGGIQISHLLFADDTLVF 1328



 Score = 29.6 bits (65), Expect(2) = 9e-10
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 1030 FLIFVMRKIDFGETWFDMV-WRLITAIFQFL 941
            FL+ VM+K+ FGE W   + W + TA F  L
Sbjct: 1225 FLLTVMQKMGFGEKWLGWIKWCISTASFSVL 1255


>emb|CAN77614.1| hypothetical protein VITISV_035196 [Vitis vinifera]
          Length = 1522

 Score = 59.3 bits (142), Expect(2) = 9e-10
 Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
 Frame = -2

Query: 956  NFSVLINGGPFDFFPCSRGFRHGEPLFPVMFILSSEILSRMLNSLI---LNSNCKTFATP 786
            +FS+L+NG P  +F  SRG R G+PL P +F+L  E+LS ML   +     S C+     
Sbjct: 928  SFSILVNGVPAGYFSNSRGLRQGDPLSPYLFVLGMEVLSTMLRRAVNGGFTSGCRIQGRG 987

Query: 785  NRHNPITHLTNADNFLIF 732
                 ++HL  AD+ +IF
Sbjct: 988  GMEINVSHLLFADDTIIF 1005



 Score = 30.8 bits (68), Expect(2) = 9e-10
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 1030 FLIFVMRKIDFGETWFDMVWRLI-TAIFQFL 941
            FL+ VMRK+ FG+ W   +W  I TA F  L
Sbjct: 902  FLMKVMRKMGFGDRWLKWIWWCISTASFSIL 932


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 57.0 bits (136), Expect(3) = 1e-09
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
 Frame = -2

Query: 332 SNFIWGISEYGKRFHWRRWSELCFPVEEGGVGFYNLSDIVKALNCK-LW*RFRCQNSLWA 156
           + F W  +   +  HW  W +LC    +GG+GF N+ D   AL  K LW      +SL+A
Sbjct: 607 AKFWWSSNGDSRGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFA 666

Query: 155 FFFLKQKYVGDSHPNEIILNPGSSHTWKHLMAVKNFMERNIVWDIVDG 12
             F K +Y   S+P + I +   S+ W+ +++ ++ + + ++  +  G
Sbjct: 667 KVF-KGRYFRKSNPLDSIKSYSPSYGWRSMISARSLVYKGLIKRVGSG 713



 Score = 31.6 bits (70), Expect(3) = 1e-09
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = -1

Query: 525 GQKSKNLFSDLTSKISSKIWGWSNKFLSAGDK 430
           G K+K +FS +  ++ S+I GWS KFLS G K
Sbjct: 543 GSKTK-VFSFVRDRLQSRINGWSAKFLSKGGK 573



 Score = 20.4 bits (41), Expect(3) = 1e-09
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -3

Query: 436 GQIVLLKSVLMGFPIHLFAVRHPPKGVLDEL 344
           G+ V++KSV    P ++ +    PK +  +L
Sbjct: 572 GKEVMIKSVAATLPRYVMSCFRLPKAITSKL 602


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