BLASTX nr result

ID: Cephaelis21_contig00018541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018541
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520898.1| conserved hypothetical protein [Ricinus comm...    85   4e-14
ref|XP_003612153.1| F-box family protein [Medicago truncatula] g...    57   7e-06

>ref|XP_002520898.1| conserved hypothetical protein [Ricinus communis]
            gi|223540029|gb|EEF41607.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 358

 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 87/295 (29%), Positives = 132/295 (44%), Gaps = 6/295 (2%)
 Frame = +2

Query: 164  LPVCCDLLCFWSSFNNDISIKLCNPKTGQMHYLPLPIPSGKTWIRWMGSLVFGY-DAYKG 340
            LP C  L+CF +    D  I +CNP T Q+  L LP+   +T I   G   FGY D+ KG
Sbjct: 96   LPSCSGLVCFAT----DTRIYVCNPATRQI--LALPVSPQRTSIAGFG---FGYVDSIKG 146

Query: 341  EYTLVSVLAKPIKEIDGWKILAKKFTFDRSYNNVSSSVWKDVEEGCPRFVGSGILTDNFM 520
             Y +V ++ +PI       +     T D   +N +SS W  ++EGCP       L + F 
Sbjct: 147  -YKVVRLIHRPITHTIECSVFT--ITSDPKNSNSNSSSWTLLDEGCP------YLVEQFS 197

Query: 521  YWLIASP--EQKLRHQFPAFLRRQNEVIVSLDLDTETFGIINCPPTPAWESKMEFDSTHI 694
            Y + A      K+  +    LRR N+ IVS ++    F  +  P      +     S+H 
Sbjct: 198  YPVFAKDCIFWKINRRSHRQLRRSNDYIVSFNVRDNKFSTLTHP------ADWRHISSHF 251

Query: 695  TMI-DFKGTLCLIDTQAMSKTNVLELWALKS--NSYWEEKYTIELRSPINHRQPLIRPKS 865
            T + D  GTLC+++    S    + +W LK   N +W +   I+++     R+ +   K 
Sbjct: 252  TQLADLGGTLCMVEISTCS----VVIWVLKDHHNCFWHKGGLIDIKG--IDRRLVGEVKC 305

Query: 866  SKEGELIMTSDVDGKFYLYNPETNSFRVVTQPNHTGTGDSGSHLVPHFIWESLFS 1030
             + GE+I +S +      Y+     FR VT P      D G +      WES FS
Sbjct: 306  LRNGEIIFSS-LANILLFYDVNQKRFRQVTLP--VRALDFGIY------WESFFS 351


>ref|XP_003612153.1| F-box family protein [Medicago truncatula]
            gi|355513488|gb|AES95111.1| F-box family protein
            [Medicago truncatula]
          Length = 507

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 69/290 (23%), Positives = 118/290 (40%), Gaps = 12/290 (4%)
 Frame = +2

Query: 173  CCDLLCFWS-SFNNDISIKLCNPKTGQMHYLPLPIPSGKTWIRWMGSLVFGYDAYKGEYT 349
            C  LLC    SF N + I  CNP TG+   LP  I + +  +R +G   FG+     EY 
Sbjct: 185  CNGLLCLSDPSFGNPLVI--CNPVTGEFIRLPESI-ADQNRVRRLGQAGFGFQPKTNEYK 241

Query: 350  LVSVLAKPIKEIDGWKILAKKFTFDRSYNNVSSSVWKDVEEGCPRFVGSGI----LTDNF 517
            ++++  + +K  + W+   ++ T +   N + +  W++VE   P+   S +      +  
Sbjct: 242  VINMWVRHVKRANVWEF--ERLTLE--INTLGTPSWRNVEVD-PQISFSSLKYPTCVNGA 296

Query: 518  MYWLIASPEQKLRHQFPAFLRRQNEVIVSLDLDTETFGIINCPPTPAWESKMEF-DSTHI 694
            ++WL          +F    R     I+    ++ET      PP         F  + HI
Sbjct: 297  LHWL----------RFDGLQRS----ILIFCFESETLKSFPSPPQMFGNHNNGFLSNRHI 342

Query: 695  TMIDFKGTLCLIDTQAMSKTNVLELWALKSNSYWEEKYTIEL-----RSPINHRQPLIRP 859
            +M + KG L + D+  +S  ++  +        W + Y I+       S +  R  L  P
Sbjct: 343  SMGELKGFLYICDSTFLSDVSMWVMNEYGIGESWTKIYNIDTSFNPSESRVPRRYGLSWP 402

Query: 860  -KSSKEGELIMTSDVDGKFYLYNPETNSFRVVTQPNHTGTGDSGSHLVPH 1006
             K  +EG  I+       F  Y PE   F V       G+  +   ++PH
Sbjct: 403  IKHFEEGAAILLYHSCNCFIYYEPEKYGFEVF---RIYGSSSNFFEVIPH 449


Top