BLASTX nr result

ID: Cephaelis21_contig00017838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017838
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266642.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   393   e-107
emb|CBI27579.3| unnamed protein product [Vitis vinifera]              387   e-105
ref|XP_003524885.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   374   e-102
ref|XP_002514958.1| ATP-dependent RNA helicase, putative [Ricinu...   374   e-102
ref|XP_002314547.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100

>ref|XP_002266642.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Vitis vinifera]
          Length = 700

 Score =  393 bits (1010), Expect = e-107
 Identities = 199/242 (82%), Positives = 218/242 (90%)
 Frame = -3

Query: 728 IAVTQPXXXXXXXXXXXXAQELGVQLGEEVGYAIRFEDRTSAKTCIKYLTDGLLLRESLS 549
           +AVTQP            AQELGVQLGEEVGYAIRFEDRTS +T IKYLTDG+LLRESLS
Sbjct: 52  VAVTQPRRVAAVSVARRVAQELGVQLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLS 111

Query: 548 NPELSQYSVIILDEAHERSLNTDILLGLMRRLIKLRTSNLKVLITSATLDGEKVSRFFSN 369
           NP+LSQYSVIILDEAHERSLNTDILLGLM+RL+K+R SNLKVLITSATLDG KVSRFFSN
Sbjct: 112 NPDLSQYSVIILDEAHERSLNTDILLGLMKRLVKMRASNLKVLITSATLDGSKVSRFFSN 171

Query: 368 CPILNVPGKLFPVEIVHSLEPSKSYVDASLEMAIDVHVKEPEGDVLIFMTGQDDIEKLIT 189
           CPIL VPGKLFPVEI++S E  KSY+++SL+ AID+HV+EPEGDVLIFMTGQDDIEKL+ 
Sbjct: 172 CPILTVPGKLFPVEILYSAELPKSYIESSLKTAIDIHVREPEGDVLIFMTGQDDIEKLVV 231

Query: 188 KLEERIQRLEEGSCMDAIVLPLHGSLPPELQVRVFSRPPPNCRRFIVATNIAETSLTVDG 9
           KLEER++ LEEGSCMDAI+LPLHGSLPPELQVRVFS PPPNCRRFIVATNIAETSLTVDG
Sbjct: 232 KLEERVRSLEEGSCMDAIILPLHGSLPPELQVRVFSPPPPNCRRFIVATNIAETSLTVDG 291

Query: 8   VV 3
           VV
Sbjct: 292 VV 293


>emb|CBI27579.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score =  387 bits (995), Expect = e-105
 Identities = 199/246 (80%), Positives = 218/246 (88%), Gaps = 4/246 (1%)
 Frame = -3

Query: 728 IAVTQPXXXXXXXXXXXXAQELGVQLGEEVGYAIRFEDRTSAKTCIKYLTDGLLLRESLS 549
           +AVTQP            AQELGVQLGEEVGYAIRFEDRTS +T IKYLTDG+LLRESLS
Sbjct: 52  VAVTQPRRVAAVSVARRVAQELGVQLGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLS 111

Query: 548 NPELSQYSVIILDEAHERSLNTDILLGLMRRLIKLRTSNLKVLITSATLDGEKVSRFFSN 369
           NP+LSQYSVIILDEAHERSLNTDILLGLM+RL+K+R SNLKVLITSATLDG KVSRFFSN
Sbjct: 112 NPDLSQYSVIILDEAHERSLNTDILLGLMKRLVKMRASNLKVLITSATLDGSKVSRFFSN 171

Query: 368 CPILNVPGKLFPVEIVHSLEPSKSYVDASLEMAIDVHVKEPEGDVLIFMTGQDDIEKLIT 189
           CPIL VPGKLFPVEI++S E  KSY+++SL+ AID+HV+EPEGDVLIFMTGQDDIEKL+ 
Sbjct: 172 CPILTVPGKLFPVEILYSAELPKSYIESSLKTAIDIHVREPEGDVLIFMTGQDDIEKLVV 231

Query: 188 KLEERIQRLEEGSCMDAIVLPLHGSLPPELQ----VRVFSRPPPNCRRFIVATNIAETSL 21
           KLEER++ LEEGSCMDAI+LPLHGSLPPELQ    VRVFS PPPNCRRFIVATNIAETSL
Sbjct: 232 KLEERVRSLEEGSCMDAIILPLHGSLPPELQASFFVRVFSPPPPNCRRFIVATNIAETSL 291

Query: 20  TVDGVV 3
           TVDGVV
Sbjct: 292 TVDGVV 297


>ref|XP_003524885.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Glycine max]
          Length = 696

 Score =  374 bits (961), Expect = e-102
 Identities = 183/242 (75%), Positives = 217/242 (89%)
 Frame = -3

Query: 728 IAVTQPXXXXXXXXXXXXAQELGVQLGEEVGYAIRFEDRTSAKTCIKYLTDGLLLRESLS 549
           IA+TQP            A ELGVQLGEEVGYAIRFEDRTS  T IKYLTDG+LLRESL+
Sbjct: 49  IAITQPRRVAAVSVARRVAHELGVQLGEEVGYAIRFEDRTSHSTRIKYLTDGVLLRESLA 108

Query: 548 NPELSQYSVIILDEAHERSLNTDILLGLMRRLIKLRTSNLKVLITSATLDGEKVSRFFSN 369
           NPEL++YSVIILDEAHERSLNTDIL+GLMRRL+ +R+S+LKVLITSATLDGEKVS+FF++
Sbjct: 109 NPELNEYSVIILDEAHERSLNTDILMGLMRRLVNIRSSDLKVLITSATLDGEKVSKFFAD 168

Query: 368 CPILNVPGKLFPVEIVHSLEPSKSYVDASLEMAIDVHVKEPEGDVLIFMTGQDDIEKLIT 189
           CP+LNVPGKL+PVE+++S E   SY+++SL+ A+D+H++EPEGD+LIFMTGQDDIEKL++
Sbjct: 169 CPVLNVPGKLYPVEVLYSRERPSSYLESSLKTALDIHIREPEGDILIFMTGQDDIEKLVS 228

Query: 188 KLEERIQRLEEGSCMDAIVLPLHGSLPPELQVRVFSRPPPNCRRFIVATNIAETSLTVDG 9
           KLE++++ LEEGSCMDAI+LPLHGSLPPELQVRVFS PPPNCRR IVATNIAETSLTVDG
Sbjct: 229 KLEDKVRALEEGSCMDAIILPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDG 288

Query: 8   VV 3
           VV
Sbjct: 289 VV 290


>ref|XP_002514958.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546009|gb|EEF47512.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 702

 Score =  374 bits (961), Expect = e-102
 Identities = 188/242 (77%), Positives = 212/242 (87%)
 Frame = -3

Query: 728 IAVTQPXXXXXXXXXXXXAQELGVQLGEEVGYAIRFEDRTSAKTCIKYLTDGLLLRESLS 549
           I +TQP            AQELGV LGEEVGYAIRFEDRTS  T IKYLTDG+LLRESLS
Sbjct: 52  IGITQPRRVAAVSVARRVAQELGVTLGEEVGYAIRFEDRTSELTRIKYLTDGVLLRESLS 111

Query: 548 NPELSQYSVIILDEAHERSLNTDILLGLMRRLIKLRTSNLKVLITSATLDGEKVSRFFSN 369
            PEL+QYSVIILDEAHERSLNTD+LLGL++RL+KLR SNLKVLITSATLDGEKVS FFS 
Sbjct: 112 GPELNQYSVIILDEAHERSLNTDVLLGLVKRLVKLRASNLKVLITSATLDGEKVSEFFSG 171

Query: 368 CPILNVPGKLFPVEIVHSLEPSKSYVDASLEMAIDVHVKEPEGDVLIFMTGQDDIEKLIT 189
           CPILNVPGKL+PVEI++S E   SY++++L+ AID+H +EPEGD+LIFMTGQDDIEKL+ 
Sbjct: 172 CPILNVPGKLYPVEIMYSKERPTSYIESALKTAIDIHTREPEGDILIFMTGQDDIEKLVM 231

Query: 188 KLEERIQRLEEGSCMDAIVLPLHGSLPPELQVRVFSRPPPNCRRFIVATNIAETSLTVDG 9
           KLE+RI+ LEEGSCMDAI+LPLHGSLPP+LQVRVF+ PPPNCRRFIVATNIAETSLTVDG
Sbjct: 232 KLEDRIRSLEEGSCMDAIILPLHGSLPPDLQVRVFAPPPPNCRRFIVATNIAETSLTVDG 291

Query: 8   VV 3
           VV
Sbjct: 292 VV 293


>ref|XP_002314547.1| predicted protein [Populus trichocarpa] gi|222863587|gb|EEF00718.1|
           predicted protein [Populus trichocarpa]
          Length = 699

 Score =  370 bits (951), Expect = e-100
 Identities = 190/250 (76%), Positives = 214/250 (85%), Gaps = 8/250 (3%)
 Frame = -3

Query: 728 IAVTQPXXXXXXXXXXXXAQELGVQLGEEVGYAIRFEDRTSAKTCIKYLTDGLLLRESLS 549
           IAVTQP            AQELGV LGEEVGYAIRFEDRTS  T IKYLTDG+LLRE LS
Sbjct: 53  IAVTQPRRVAAVSVARRVAQELGVTLGEEVGYAIRFEDRTSDLTRIKYLTDGVLLRECLS 112

Query: 548 NPELSQYSVIILDEAHERSLNTDILLGLMRRLIKLRTSNLKVLITSATLDGEKVSRFFSN 369
           NPEL+QYSVIILDEAHERSLNTDIL+GL++RL+K+R S LKVLITSATLDGEKVS FFS+
Sbjct: 113 NPELNQYSVIILDEAHERSLNTDILMGLVKRLVKMRASKLKVLITSATLDGEKVSEFFSD 172

Query: 368 CPILNVPGKLFPVEIVHSLEPSKSYVDASLEMAIDVHVKEPEGDVLIFMTGQDDIEKLIT 189
           CP+LNVPGKL+PVEI++S E  KSY+++S   A+D+HV+EPEGDVLIFMTGQDDI+KL++
Sbjct: 173 CPVLNVPGKLYPVEILYSEERPKSYIESSFRTAMDIHVREPEGDVLIFMTGQDDIDKLVS 232

Query: 188 KLEERIQRLEEGSCMDAIVLPLHGSLPPELQ--------VRVFSRPPPNCRRFIVATNIA 33
           KLE+R+Q LEEGSCMDAI+LPLHGSLPPELQ        VRVFS PPPNCRRFIVATNIA
Sbjct: 233 KLEDRVQSLEEGSCMDAIILPLHGSLPPELQAGLSFLLFVRVFSPPPPNCRRFIVATNIA 292

Query: 32  ETSLTVDGVV 3
           ETSLTVDGVV
Sbjct: 293 ETSLTVDGVV 302


Top