BLASTX nr result

ID: Cephaelis21_contig00017766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017766
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   130   1e-28
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,...   127   7e-28
ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26

>ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|222858292|gb|EEE95839.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  132 bits (333), Expect = 2e-29
 Identities = 57/98 (58%), Positives = 80/98 (81%)
 Frame = +3

Query: 12  SELPILYATLIQTCTRESAFVQGLQFQAHAVKSGLERDRFVGNSLLALYFKLCPNFRDTR 191
           S  P  YA+L+QTCT+  +F  G+QF +HA+KSGL+ DRFVGNSLLALYFKL PN  + R
Sbjct: 57  SNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEAR 116

Query: 192 KVFDGMCYRDVVSWSSMVSGYIRAGKPELSIELYLEMV 305
           +VFDG+ Y+D++SW+SM++GY++  KP+ S+EL+LEM+
Sbjct: 117 RVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEML 154


>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/98 (62%), Positives = 78/98 (79%)
 Frame = +3

Query: 12  SELPILYATLIQTCTRESAFVQGLQFQAHAVKSGLERDRFVGNSLLALYFKLCPNFRDTR 191
           S  P+LYA+L+QTCT+  AF  GLQ  AH +KSGLE DRFVGNSLL LYFKL  +F +TR
Sbjct: 56  SAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETR 115

Query: 192 KVFDGMCYRDVVSWSSMVSGYIRAGKPELSIELYLEMV 305
           KVFDG+  +DV+SW+SM+SGY+R GKP  S+EL+ +M+
Sbjct: 116 KVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKML 153



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/92 (29%), Positives = 54/92 (58%)
 Frame = +3

Query: 30  YATLIQTCTRESAFVQGLQFQAHAVKSGLERDRFVGNSLLALYFKLCPNFRDTRKVFDGM 209
           + T+++TC   +A  QG +     ++ G  RD  V ++L+ LY K C      + +FD M
Sbjct: 363 FGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAK-CGCIEYAQTIFDQM 421

Query: 210 CYRDVVSWSSMVSGYIRAGKPELSIELYLEMV 305
             R++++W+SM+ G+ + G+ E ++ ++ +MV
Sbjct: 422 PVRNLITWNSMIGGFAQNGRGEEALRIFNQMV 453


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/98 (62%), Positives = 78/98 (79%)
 Frame = +3

Query: 12  SELPILYATLIQTCTRESAFVQGLQFQAHAVKSGLERDRFVGNSLLALYFKLCPNFRDTR 191
           S  P+LYA+L+QTCT+  AF  GLQ  AH +KSGLE DRFVGNSLL LYFKL  +F +TR
Sbjct: 115 SAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETR 174

Query: 192 KVFDGMCYRDVVSWSSMVSGYIRAGKPELSIELYLEMV 305
           KVFDG+  +DV+SW+SM+SGY+R GKP  S+EL+ +M+
Sbjct: 175 KVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKML 212



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/92 (29%), Positives = 54/92 (58%)
 Frame = +3

Query: 30  YATLIQTCTRESAFVQGLQFQAHAVKSGLERDRFVGNSLLALYFKLCPNFRDTRKVFDGM 209
           + T+++TC   +A  QG +     ++ G  RD  V ++L+ LY K C      + +FD M
Sbjct: 422 FGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAK-CGCIEYAQTIFDQM 480

Query: 210 CYRDVVSWSSMVSGYIRAGKPELSIELYLEMV 305
             R++++W+SM+ G+ + G+ E ++ ++ +MV
Sbjct: 481 PVRNLITWNSMIGGFAQNGRGEEALRIFNQMV 512


>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/98 (58%), Positives = 79/98 (80%)
 Frame = +3

Query: 12  SELPILYATLIQTCTRESAFVQGLQFQAHAVKSGLERDRFVGNSLLALYFKLCPNFRDTR 191
           S  P +YA+L+QTCT+  +F  GLQ  AH VKSGLE DRFVGNSLLALYFKL  +F +TR
Sbjct: 48  SNKPFIYASLLQTCTKVVSFNHGLQIHAHVVKSGLETDRFVGNSLLALYFKLSTDFFETR 107

Query: 192 KVFDGMCYRDVVSWSSMVSGYIRAGKPELSIELYLEMV 305
           +VFDG+ +RDV+SW+SM++GY++  KP+ +++L+ EM+
Sbjct: 108 RVFDGLYFRDVISWTSMITGYVKGEKPKKALDLFWEML 145


>ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
           gi|449493172|ref|XP_004159212.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
          Length = 605

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/95 (58%), Positives = 76/95 (80%)
 Frame = +3

Query: 21  PILYATLIQTCTRESAFVQGLQFQAHAVKSGLERDRFVGNSLLALYFKLCPNFRDTRKVF 200
           P+LYA+L+QTC +  +F +G QF AH VKSGLE DRFVGNSLL+LYFKL  +   TR+VF
Sbjct: 60  PLLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVF 119

Query: 201 DGMCYRDVVSWSSMVSGYIRAGKPELSIELYLEMV 305
           DG+  +DVVSW+SM++GY+R GK  ++IEL+ +M+
Sbjct: 120 DGLFVKDVVSWASMITGYVREGKSGIAIELFWDML 154


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