BLASTX nr result

ID: Cephaelis21_contig00017730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017730
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera]   427   e-117
ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2...   426   e-117
ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1...   426   e-117
dbj|BAF91723.1| putative SHORT-ROOT protein [Ipomoea nil]             422   e-116
dbj|BAH80549.1| transcription factor GRAS family protein [Eucaly...   411   e-112

>emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera]
          Length = 480

 Score =  427 bits (1097), Expect = e-117
 Identities = 210/265 (79%), Positives = 229/265 (86%)
 Frame = -2

Query: 1035 FCTQWPTLLEALATRTDETPHLRLTTVVVSKTGSVNGGVAAVQKVMKEIGSRMEKFARLM 856
            +CTQWPTLLEALATRTDETPHLRLTTVV SK G+  GG+A VQK+MKEIG+RMEKFARLM
Sbjct: 220  YCTQWPTLLEALATRTDETPHLRLTTVVTSKAGT--GGMAPVQKLMKEIGNRMEKFARLM 277

Query: 855  GVPFKFNVVHHAGDLSELNLVELDIKDDEVLAINCVGALHSVSTLGNRREFLISIFRRLQ 676
            GVPFKFNV+HH+GDLS LNL ELDIKDDE LA+NCVGALHSV+ +GNRR+ ++S FRRL 
Sbjct: 278  GVPFKFNVLHHSGDLSHLNLAELDIKDDEALAVNCVGALHSVTAVGNRRDIVVSSFRRLH 337

Query: 675  PRIIAIVEEEADLXXXXXXXXXXXXFQECLRWFRVYFESLDDSFPKTSNERLMLERQAGR 496
            PRII +VEEEADL            FQECLRWFRVY ESLD+SFP+TSNERLMLER AGR
Sbjct: 338  PRIITVVEEEADLDVGVDGFDFVKGFQECLRWFRVYLESLDESFPRTSNERLMLERAAGR 397

Query: 495  AIVDLVACPPAESIERRETATRWSHRLHAGGFGPVSFSDEVCDDVRALLRRYKEGWSMAQ 316
            AIVDLVACPP+ESIERRETATRWS RLHA GF PVSFSDEVCDDVRALLRRYKEGWSM Q
Sbjct: 398  AIVDLVACPPSESIERRETATRWSQRLHASGFSPVSFSDEVCDDVRALLRRYKEGWSMTQ 457

Query: 315  CPDDSAGIFLSWKDQPVVWASSWRP 241
              D  AGIFLSWKDQPVVW S+W+P
Sbjct: 458  SSD--AGIFLSWKDQPVVWTSAWKP 480


>ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2 [Vitis vinifera]
          Length = 509

 Score =  426 bits (1096), Expect = e-117
 Identities = 210/265 (79%), Positives = 228/265 (86%)
 Frame = -2

Query: 1035 FCTQWPTLLEALATRTDETPHLRLTTVVVSKTGSVNGGVAAVQKVMKEIGSRMEKFARLM 856
            +CTQWPTLLEALATRTDETPHLRLTTVV SK G+  GG+A VQK+MKEIG+RMEKFARLM
Sbjct: 249  YCTQWPTLLEALATRTDETPHLRLTTVVTSKAGT--GGMAPVQKLMKEIGNRMEKFARLM 306

Query: 855  GVPFKFNVVHHAGDLSELNLVELDIKDDEVLAINCVGALHSVSTLGNRREFLISIFRRLQ 676
            GVPFKFNV+HH+GDLS LNL ELDIKDDE LA+NCVGALHSV+  GNRR+ ++S FRRL 
Sbjct: 307  GVPFKFNVLHHSGDLSHLNLAELDIKDDEALAVNCVGALHSVTAFGNRRDIVVSSFRRLH 366

Query: 675  PRIIAIVEEEADLXXXXXXXXXXXXFQECLRWFRVYFESLDDSFPKTSNERLMLERQAGR 496
            PRII +VEEEADL            FQECLRWFRVY ESLD+SFP+TSNERLMLER AGR
Sbjct: 367  PRIITVVEEEADLDVGVDGFDFVKGFQECLRWFRVYLESLDESFPRTSNERLMLERAAGR 426

Query: 495  AIVDLVACPPAESIERRETATRWSHRLHAGGFGPVSFSDEVCDDVRALLRRYKEGWSMAQ 316
            AIVDLVACPP+ESIERRETATRWS RLHA GF PVSFSDEVCDDVRALLRRYKEGWSM Q
Sbjct: 427  AIVDLVACPPSESIERRETATRWSQRLHASGFSPVSFSDEVCDDVRALLRRYKEGWSMTQ 486

Query: 315  CPDDSAGIFLSWKDQPVVWASSWRP 241
              D  AGIFLSWKDQPVVW S+W+P
Sbjct: 487  SSD--AGIFLSWKDQPVVWTSAWKP 509


>ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1 [Vitis vinifera]
          Length = 494

 Score =  426 bits (1096), Expect = e-117
 Identities = 210/265 (79%), Positives = 228/265 (86%)
 Frame = -2

Query: 1035 FCTQWPTLLEALATRTDETPHLRLTTVVVSKTGSVNGGVAAVQKVMKEIGSRMEKFARLM 856
            +CTQWPTLLEALATRTDETPHLRLTTVV SK G+  GG+A VQK+MKEIG+RMEKFARLM
Sbjct: 234  YCTQWPTLLEALATRTDETPHLRLTTVVTSKAGT--GGMAPVQKLMKEIGNRMEKFARLM 291

Query: 855  GVPFKFNVVHHAGDLSELNLVELDIKDDEVLAINCVGALHSVSTLGNRREFLISIFRRLQ 676
            GVPFKFNV+HH+GDLS LNL ELDIKDDE LA+NCVGALHSV+  GNRR+ ++S FRRL 
Sbjct: 292  GVPFKFNVLHHSGDLSHLNLAELDIKDDEALAVNCVGALHSVTAFGNRRDIVVSSFRRLH 351

Query: 675  PRIIAIVEEEADLXXXXXXXXXXXXFQECLRWFRVYFESLDDSFPKTSNERLMLERQAGR 496
            PRII +VEEEADL            FQECLRWFRVY ESLD+SFP+TSNERLMLER AGR
Sbjct: 352  PRIITVVEEEADLDVGVDGFDFVKGFQECLRWFRVYLESLDESFPRTSNERLMLERAAGR 411

Query: 495  AIVDLVACPPAESIERRETATRWSHRLHAGGFGPVSFSDEVCDDVRALLRRYKEGWSMAQ 316
            AIVDLVACPP+ESIERRETATRWS RLHA GF PVSFSDEVCDDVRALLRRYKEGWSM Q
Sbjct: 412  AIVDLVACPPSESIERRETATRWSQRLHASGFSPVSFSDEVCDDVRALLRRYKEGWSMTQ 471

Query: 315  CPDDSAGIFLSWKDQPVVWASSWRP 241
              D  AGIFLSWKDQPVVW S+W+P
Sbjct: 472  SSD--AGIFLSWKDQPVVWTSAWKP 494


>dbj|BAF91723.1| putative SHORT-ROOT protein [Ipomoea nil]
          Length = 505

 Score =  422 bits (1085), Expect = e-116
 Identities = 206/268 (76%), Positives = 234/268 (87%), Gaps = 3/268 (1%)
 Frame = -2

Query: 1035 FCTQWPTLLEALATRTDETPHLRLTTVVVSKT--GSVNGGVAAVQKVMKEIGSRMEKFAR 862
            FCTQWPTLLEALATRTDETPHLRLTTVVV+K   G  +GG A++QKVMKEIG+RMEKF R
Sbjct: 238  FCTQWPTLLEALATRTDETPHLRLTTVVVNKAFGGGGSGGAASIQKVMKEIGNRMEKFGR 297

Query: 861  LMGVPFKFNVVHHAGDLSELNLVELDIKDDEVLAINCVGALHSVSTLGNRREFLISIFRR 682
            LMGVPFKFNV+HH+GDLS+L+L  LDIK+DE LAIN VGALHSV+ +G+RR++LIS+FRR
Sbjct: 298  LMGVPFKFNVIHHSGDLSDLDLSALDIKEDEALAINSVGALHSVTAVGSRRDYLISVFRR 357

Query: 681  LQPRIIAIVEEEADLXXXXXXXXXXXXFQECLRWFRVYFESLDDSFPKTSNERLMLERQA 502
            LQPRI+ +VEEEA++            FQECLRWFRVYFESLD+SFPKTSNERLMLERQA
Sbjct: 358  LQPRILTVVEEEANVDVGVEGFDFVRDFQECLRWFRVYFESLDESFPKTSNERLMLERQA 417

Query: 501  GRAIVDLVACPPAESIERRETATRWSHRLHAGGFGPVSFSDEVCDDVRALLRRYKEGWSM 322
            GRAIVDLVACPP++SIERRETA RWS RLHA GF P+ +SDEVCDDVRALLRRY+EGW+M
Sbjct: 418  GRAIVDLVACPPSQSIERRETAERWSRRLHAAGFTPIPYSDEVCDDVRALLRRYREGWTM 477

Query: 321  AQCPDD-SAGIFLSWKDQPVVWASSWRP 241
            A C  D SAGIFLSWKDQPVVWAS+WRP
Sbjct: 478  APCSGDLSAGIFLSWKDQPVVWASAWRP 505


>dbj|BAH80549.1| transcription factor GRAS family protein [Eucalyptus grandis]
          Length = 494

 Score =  411 bits (1056), Expect = e-112
 Identities = 205/266 (77%), Positives = 227/266 (85%), Gaps = 2/266 (0%)
 Frame = -2

Query: 1035 FCTQWPTLLEALATRTDETPHLRLTTVVVSKT--GSVNGGVAAVQKVMKEIGSRMEKFAR 862
            +CTQWPTLLEALATRTDETPHLRLTTVVVSK   G+   GVAAVQKVMKEIGSRMEKFAR
Sbjct: 230  YCTQWPTLLEALATRTDETPHLRLTTVVVSKANGGAETSGVAAVQKVMKEIGSRMEKFAR 289

Query: 861  LMGVPFKFNVVHHAGDLSELNLVELDIKDDEVLAINCVGALHSVSTLGNRREFLISIFRR 682
            LMGVPFKF+V++H+GDLSELNL ELDIK+DE LAINCVGALHS +T+ NRR+F++S FRR
Sbjct: 290  LMGVPFKFSVLYHSGDLSELNLDELDIKEDEALAINCVGALHSTTTVSNRRDFVVSSFRR 349

Query: 681  LQPRIIAIVEEEADLXXXXXXXXXXXXFQECLRWFRVYFESLDDSFPKTSNERLMLERQA 502
            LQPRII +VEEEADL            FQE LR+FRVYFESLD+SFP+TSNERLMLER A
Sbjct: 350  LQPRIITVVEEEADLDVGGDGIEFVRGFQESLRYFRVYFESLDESFPRTSNERLMLERGA 409

Query: 501  GRAIVDLVACPPAESIERRETATRWSHRLHAGGFGPVSFSDEVCDDVRALLRRYKEGWSM 322
            GRA++DLVACPP  S+ERRE A+RWS RL  GGF P  FSDEVCDDVRALLRRYKEGWSM
Sbjct: 410  GRAVMDLVACPPHHSVERREPASRWSRRLRGGGFNPCLFSDEVCDDVRALLRRYKEGWSM 469

Query: 321  AQCPDDSAGIFLSWKDQPVVWASSWR 244
              CPD  AGIFL+WKDQPVVWAS+WR
Sbjct: 470  TPCPD--AGIFLTWKDQPVVWASAWR 493


Top