BLASTX nr result

ID: Cephaelis21_contig00017710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017710
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522724.1| 30S ribosomal protein S10, putative [Ricinus...   217   3e-56
gb|AFK36859.1| unknown [Lotus japonicus]                              212   4e-56
sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, ...   214   8e-55
ref|XP_004150471.1| PREDICTED: 30S ribosomal protein S10, chloro...   214   1e-53
gb|ABB97026.1| unknown [Brassica rapa]                                213   4e-53

>ref|XP_002522724.1| 30S ribosomal protein S10, putative [Ricinus communis]
           gi|223537962|gb|EEF39575.1| 30S ribosomal protein S10,
           putative [Ricinus communis]
          Length = 208

 Score =  217 bits (553), Expect(2) = 3e-56
 Identities = 106/123 (86%), Positives = 114/123 (92%)
 Frame = +3

Query: 441 DSDMDEAPALETSSGADSDMVAPKHKIRIKLRSYWVPLIEDSCKQIMDAAKNTNAKTMGP 620
           DS+   +P++  S  AD+D +APK KIRIKLRSYWVPLIEDSCKQIMDAA+NTNAKTMGP
Sbjct: 88  DSETSSSPSI--SIAADADKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGP 145

Query: 621 VPLPTKKRVYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVE 800
           VPLPTKKR+YCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVE
Sbjct: 146 VPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVE 205

Query: 801 VKL 809
           VKL
Sbjct: 206 VKL 208



 Score = 28.5 bits (62), Expect(2) = 3e-56
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
 Frame = +2

Query: 173 TFLP-IGNSTSISGKPN----FSLHSLPLNGPKLQTPL-LRPLVSKVSAAPEVLDSTTT 331
           T +P +  S S + KP     FS  SL L      + L L    S++ AAPE LDS  T
Sbjct: 10  TLIPSLATSPSFASKPTTTKLFSCSSLSLQANSFSSTLKLSTSTSRLCAAPETLDSQAT 68


>gb|AFK36859.1| unknown [Lotus japonicus]
          Length = 196

 Score =  212 bits (540), Expect(2) = 4e-56
 Identities = 102/121 (84%), Positives = 109/121 (90%)
 Frame = +3

Query: 447 DMDEAPALETSSGADSDMVAPKHKIRIKLRSYWVPLIEDSCKQIMDAAKNTNAKTMGPVP 626
           D+        S G D+D +APK KIRIKLRSYWVPLIEDSCKQI++AA+NTNAKTMGPVP
Sbjct: 76  DLGTPSTSSISIGGDADAMAPKQKIRIKLRSYWVPLIEDSCKQILEAARNTNAKTMGPVP 135

Query: 627 LPTKKRVYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVK 806
           LPTKKR+YCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVK
Sbjct: 136 LPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVK 195

Query: 807 L 809
           L
Sbjct: 196 L 196



 Score = 32.7 bits (73), Expect(2) = 4e-56
 Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = +2

Query: 179 LPIGNSTSISGKPNFSLHSLPLNGPKLQTPLLRPLVSK--VSAAPEVLDSTTTSFED 343
           L + NS   S KP F   S  L+G  L+   L+PL S   + AAPEVLDST T  +D
Sbjct: 14  LSLSNS---SPKPKFPSLSF-LSGNTLRLTTLKPLHSSTVLKAAPEVLDSTETLEDD 66


>sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, chloroplastic; Flags:
           Precursor gi|188036211|pdb|3BBN|J Chain J, Homology
           Model For The Spinach Chloroplast 30s Subunit Fitted To
           9.4a Cryo-Em Map Of The 70s Chlororibosome.
           gi|7578929|gb|AAF64190.1|AF245665_1 plastid ribosomal
           protein S10 precursor [Mesembryanthemum crystallinum]
          Length = 197

 Score =  214 bits (546), Expect(2) = 8e-55
 Identities = 108/129 (83%), Positives = 117/129 (90%), Gaps = 3/129 (2%)
 Frame = +3

Query: 432 SGADSDMDEAPALETSS---GADSDMVAPKHKIRIKLRSYWVPLIEDSCKQIMDAAKNTN 602
           +G +S ++E    ETS+   GADSD +APK KIRIKLRSYWVPLIEDSCKQIMDAA+ TN
Sbjct: 71  TGPESYVEEGS--ETSALGIGADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTN 128

Query: 603 AKTMGPVPLPTKKRVYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLP 782
           AKTMGPVPLPTKKR++CVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLP
Sbjct: 129 AKTMGPVPLPTKKRIFCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLP 188

Query: 783 AGVDVEVKL 809
           AGVDVEVKL
Sbjct: 189 AGVDVEVKL 197



 Score = 26.2 bits (56), Expect(2) = 8e-55
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
 Frame = +2

Query: 179 LPIGNSTSISGKPNFSLHSLPLNGPKLQTPLLRPLVS-------KVSAAPEVLDSTTTSF 337
           L + NS+S   KP  S  SL  +   L+  L     S       +V AAPEVL+S  T  
Sbjct: 14  LALSNSSSFPNKPQVSNLSLHSSLSNLRRTLSHSSPSSSSSSNVRVFAAPEVLESQETGP 73

Query: 338 E 340
           E
Sbjct: 74  E 74


>ref|XP_004150471.1| PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Cucumis
           sativus] gi|449519589|ref|XP_004166817.1| PREDICTED: 30S
           ribosomal protein S10, chloroplastic-like [Cucumis
           sativus]
          Length = 206

 Score =  214 bits (545), Expect(2) = 1e-53
 Identities = 107/125 (85%), Positives = 112/125 (89%)
 Frame = +3

Query: 435 GADSDMDEAPALETSSGADSDMVAPKHKIRIKLRSYWVPLIEDSCKQIMDAAKNTNAKTM 614
           G D ++    AL  S G D D +APK KIRIKLRSYWVPLIEDSCKQIMDAA+NTNAKTM
Sbjct: 84  GEDFEVPGTSAL--SIGEDVDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTM 141

Query: 615 GPVPLPTKKRVYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVD 794
           GPVPLPTKKR+YCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVD
Sbjct: 142 GPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVD 201

Query: 795 VEVKL 809
           VEVKL
Sbjct: 202 VEVKL 206



 Score = 22.3 bits (46), Expect(2) = 1e-53
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
 Frame = +2

Query: 197 TSISGKPNFSLHSLPLNGPKLQTPLLRPLV-----SKVSAAPEVLDSTTT 331
           +S S KP F     P          L+PL      +++ AAPEVLDS  T
Sbjct: 21  SSHSSKPKFP----PFPASSSTALKLKPLQFSFPSTRLYAAPEVLDSPDT 66


>gb|ABB97026.1| unknown [Brassica rapa]
          Length = 190

 Score =  213 bits (543), Expect = 4e-53
 Identities = 103/123 (83%), Positives = 112/123 (91%)
 Frame = +3

Query: 441 DSDMDEAPALETSSGADSDMVAPKHKIRIKLRSYWVPLIEDSCKQIMDAAKNTNAKTMGP 620
           D  + E P+  +S   D+D +APK KIRIKLRSYWVPLIEDSCKQI+DAA+NTNAKTMGP
Sbjct: 69  DEPVSEVPS-SSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGP 127

Query: 621 VPLPTKKRVYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVE 800
           VPLPTKKR+YCVLKSPHVHKDARFHFEIRTHQR+IDILYPTAQTIDSLMQLDLPAGVDVE
Sbjct: 128 VPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVE 187

Query: 801 VKL 809
           VKL
Sbjct: 188 VKL 190


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