BLASTX nr result
ID: Cephaelis21_contig00017666
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00017666
(1699 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 125 2e-69
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 119 1e-67
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 107 4e-65
gb|ABB46931.2| retrotransposon protein, putative, unclassified [... 126 1e-64
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 127 3e-64
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 125 bits (313), Expect(4) = 2e-69
Identities = 66/171 (38%), Positives = 105/171 (61%), Gaps = 5/171 (2%)
Frame = +2
Query: 158 MMEVKEAVYLLDQDIALGTDGYTGRFYRACWDIIRGDLLNAV*EFFAGVPI-PRVASTLI 334
++E+KEA++ + D A G DG++ F+ A WDII D+ + FF + PR+ T +
Sbjct: 371 LLEIKEALFSISADKAPGPDGFSASFFHAYWDIIEADVSRDIRSFFVDSCLSPRLNETHV 430
Query: 335 VLLPKTSSPITFGYFRPISLCNFLNKIFPRILCVRMRDFMPSLISEEQSAFLQGRDISDN 514
L+PK S+P +RPI+LCN KI +IL R++ ++ LIS QSAF+ GR I+DN
Sbjct: 431 TLIPKISAPRKVSDYRPIALCNVQYKIVAKILTRRLQPWLSELISLHQSAFVPGRAIADN 490
Query: 515 ILVVQELVGHLNRRTRGR----NLILKLDMMKAFDKVSWDFLKAVLLKFWF 655
+L+ E++ L R G ++ +K DM KA+D++ W+FL+ VL++ F
Sbjct: 491 VLITHEILHFL--RVSGAKKYCSMAIKTDMSKAYDRIKWNFLQEVLMRLGF 539
Score = 97.1 bits (240), Expect(4) = 2e-69
Identities = 59/143 (41%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
Frame = +1
Query: 751 SSGLKQGDPLSPYLFILVVEALSRGLSSLVQEGLMLPYSLPRGSKQISHLCFADDTVIFT 930
S GL+QGDPLSPYLFIL E LS ++G+M+ + RGS Q++HL FADDT+ F
Sbjct: 571 SRGLRQGDPLSPYLFILCTEVLSGLCRKAQEKGVMVGIRVARGSPQVNHLLFADDTMFFC 630
Query: 931 VGLRASVYVLFDFLEQYETASGQTINRRKRSFVTSSRCP-SARKRMLASLTGVTQGSLPF 1107
L + L++YE ASGQ+IN K + SS+ P ++R+ SL +G +
Sbjct: 631 KTNPTCCGALSNILKKYELASGQSINLAKSAITFSSKTPQDIKRRVKLSLRIDNEGGIG- 689
Query: 1108 RYLGCQLFCGRPLRRYFQPLLDR 1176
+YLG GR R F ++DR
Sbjct: 690 KYLGLPEHFGRRKRDIFSSIVDR 712
Score = 72.0 bits (175), Expect(4) = 2e-69
Identities = 33/94 (35%), Positives = 53/94 (56%)
Frame = +3
Query: 1197 WKGKLLSQGGRLILIRHVLASIPIYTMASMSIPNTILYQLERLYSRFFWGADGEISKRCW 1376
W + LS G+ IL++ VL+S+P Y M +P ++ Q++ + +RF+W + + K W
Sbjct: 720 WSIRFLSSAGKQILLKAVLSSMPSYAMMCFKLPASLCKQIQSVLTRFWWDSKPDKRKMAW 779
Query: 1377 RSWDSLTFPVEENGLGVRGLKDIMTAFSCKLWWK 1478
SWD LT P+ E GLG R ++ KL W+
Sbjct: 780 VSWDKLTLPINEGGLGFREIE-------AKLSWR 806
Score = 38.9 bits (89), Expect(4) = 2e-69
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +1
Query: 4 GDRNTSFFHSMVAARRAQLFISRIKDDSGRWLQNMDDIKNQASSFFENL 150
GDRN +FH+ RR +S I+D SG+ + I + SS+F+N+
Sbjct: 289 GDRNKGYFHATTRTRRMLNNLSVIEDGSGQEFHEEEQIASTISSYFQNI 337
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 119 bits (299), Expect(4) = 1e-67
Identities = 67/170 (39%), Positives = 104/170 (61%), Gaps = 4/170 (2%)
Frame = +2
Query: 158 MMEVKEAVYLLDQDIALGTDGYTGRFYRACWDIIRGDLLNAV*EFFAGVPIPRVAS-TLI 334
++EVK+AV+ L A G DG++G FY+ W+ ++ + + + + +V + T +
Sbjct: 1039 LLEVKKAVFDLGATKAPGPDGFSGIFYQNQWEWVQSIIHESALQHQTSSSLLQVMNRTHL 1098
Query: 335 VLLPKTSSPITFGYFRPISLCNFLNKIFPRILCVRMRDFMPSLISEEQSAFLQGRDISDN 514
L+PK +P ++RPI+LCNF KI +I+ R++ FM LIS+ QSAF+ R I DN
Sbjct: 1099 ALIPKVKAPTHPSHYRPIALCNFSYKILTKIIASRLQPFMSELISDNQSAFVSNRQIQDN 1158
Query: 515 ILVVQELVGHLNRRTRGRN---LILKLDMMKAFDKVSWDFLKAVLLKFWF 655
+++ E+ HL + TR N LKLDM KA+D+V W+FL+AVL K F
Sbjct: 1159 VIIAHEIYHHL-KLTRSCNNGAFGLKLDMNKAYDRVEWNFLEAVLRKMGF 1207
Score = 89.0 bits (219), Expect(4) = 1e-67
Identities = 51/137 (37%), Positives = 73/137 (53%)
Frame = +1
Query: 742 FQASSGLKQGDPLSPYLFILVVEALSRGLSSLVQEGLMLPYSLPRGSKQISHLCFADDTV 921
F S GL+QGDPLSP+LF+ V + LSR ++ + Q+ L+ P ++ + +SHL FADD++
Sbjct: 1236 FLPSRGLRQGDPLSPFLFLFVNDVLSRMINKMCQDSLLTPVTIGPNNLPVSHLFFADDSL 1295
Query: 922 IFTVGLRASVYVLFDFLEQYETASGQTINRRKRSFVTSSRCPSARKRMLASLTGVTQGSL 1101
F + L D L Y ASGQ IN K S S P +L+S+ + S
Sbjct: 1296 FFLRATLQNCETLSDLLHTYCIASGQLINVEKSSIFFSPNTPPEIAHLLSSIMQIPVVSD 1355
Query: 1102 PFRYLGCQLFCGRPLRR 1152
P YLG F R ++
Sbjct: 1356 PGTYLGLPTFWHRSKKK 1372
Score = 72.0 bits (175), Expect(4) = 1e-67
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Frame = +3
Query: 1188 LSGWKGKLLSQGGRLILIRHVLASIPIYTMASMSIPNTILYQLERLYSRFFWGADGEISK 1367
+ GWK LSQ G+ +LI+ V +IP Y M P+T+ +L + + F+WG + +
Sbjct: 1385 VKGWKQATLSQAGKEVLIKAVATAIPAYPMGCFKFPSTLCKELNGILADFWWG-NVDTRG 1443
Query: 1368 RCWRSWDSLTFPVEENGLGVRGLKDIMTAFSCKLWWK-WKCGIGLWS------HYVRAS- 1523
W+SWD L P ++ G+G R L+D + K W+ + LW+ +Y R+S
Sbjct: 1444 IHWKSWDFLARPKKDGGMGFRNLEDFNNSLLAKQAWRLHQNPFALWARVLEQLYYPRSSF 1503
Query: 1524 -----GLSRSGAWRRILQVDEVMRQHTHVIVKDG-SCSFLYDNW 1637
G + S W +L + + + +G S + + DNW
Sbjct: 1504 LEAPKGPNPSWIWNSLLIGRNFIHKEALWNIGNGFSVNIVGDNW 1547
Score = 46.2 bits (108), Expect(4) = 1e-67
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +1
Query: 4 GDRNTSFFHSMVAARRAQLFISRIKDDSGRWLQNMDDIKNQASSFFENLLRHDG 165
GD+N+SFFH RR I R+KDD G WL + D+ Q +F L + +G
Sbjct: 957 GDQNSSFFHQTTIQRRQYNKIVRLKDDHGNWLDSEADVALQFLDYFTALYQSNG 1010
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 107 bits (267), Expect(5) = 4e-65
Identities = 59/166 (35%), Positives = 97/166 (58%), Gaps = 3/166 (1%)
Frame = +2
Query: 152 YDMMEVKEAVYLLDQDIALGTDGYTGRFYRACWDIIRGDLLNAV*EFFAGV-PIPRVAST 328
Y E++ A+ ++ + G+DG RF++ W+II D+++ F G I +
Sbjct: 716 YRREEIELALKDMNPSKSPGSDGMPARFFQKFWNIIGNDVVDVCLRFLNGDGSIADFNHS 775
Query: 329 LIVLLPKTSSPITFGYFRPISLCNFLNKIFPRILCVRMRDFMPSLISEEQSAFLQGRDIS 508
LI L+PK +P +RPISLCN + K+ ++L R++ +P +I+E QSAF+ R I
Sbjct: 776 LIALIPKVQNPKKVTEYRPISLCNVVYKLVSKVLANRLKSVLPEVIAENQSAFMSQRIIH 835
Query: 509 DNILVVQELVGHLNRRTRG--RNLILKLDMMKAFDKVSWDFLKAVL 640
DNI+ E++ L RR + + + LKLDM KA+D+V W FL+ ++
Sbjct: 836 DNIIAAFEIIHCLKRRGKDSRQKIALKLDMTKAYDRVEWGFLQRMM 881
Score = 91.3 bits (225), Expect(5) = 4e-65
Identities = 50/142 (35%), Positives = 77/142 (54%)
Frame = +1
Query: 751 SSGLKQGDPLSPYLFILVVEALSRGLSSLVQEGLMLPYSLPRGSKQISHLCFADDTVIFT 930
S GL+QGDP+SPYLF++V E LS + +E + ++ RG+ +SHL +ADD+++F
Sbjct: 918 SRGLRQGDPISPYLFLIVAEGLSALIRKAEREQQIHGVAIARGAPSVSHLFYADDSLLFC 977
Query: 931 VGLRASVYVLFDFLEQYETASGQTINRRKRSFVTSSRCPSARKRMLASLTGVTQGSLPFR 1110
L + YE ASGQ IN+ K + S + P+A K +++ + R
Sbjct: 978 DATVTDCMALKNIFSTYEAASGQKINKDKSAICFSPKSPAAIKEACSAILDMPVVPCHER 1037
Query: 1111 YLGCQLFCGRPLRRYFQPLLDR 1176
YLG G+ ++ FQ L DR
Sbjct: 1038 YLGLPTVSGKDKKKLFQSLPDR 1059
Score = 73.9 bits (180), Expect(5) = 4e-65
Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Frame = +3
Query: 1194 GWKGKLLSQGGRLILIRHVLASIPIYTMASMSIPNTILYQLERLYSRFFWGADGEISKRC 1373
GW+GKLLS+ G+ +LI+ V +IP YTM+ +P + + +RF+WG +G
Sbjct: 1066 GWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVARFWWGKEGGKGIH- 1124
Query: 1374 WRSWDSLTFPVEENGLGVRGLKDIMTAFSCKLWWK------------WKCGIGLWSHYVR 1517
WR W L F ++ GLG R L A K W+ K W ++
Sbjct: 1125 WRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYFPWDDFME 1184
Query: 1518 AS-GLSRSGAWRRILQVDEVMRQHTHVIVKDG 1610
A G S S WR L E++R+ + DG
Sbjct: 1185 AELGSSPSYLWRSFLWGRELLRKGVRWRIGDG 1216
Score = 37.0 bits (84), Expect(5) = 4e-65
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +1
Query: 4 GDRNTSFFHSMVAARRAQLFISRIKDDSGRWLQNMDDIKNQASSFFENLLRHDG 165
GDRNT FFH R I I + RW ++ DI S+F NL G
Sbjct: 636 GDRNTQFFHQTAKQRGRSNRICGILGEDNRWRSDVTDIGCVFVSYFRNLFTAGG 689
Score = 29.3 bits (64), Expect(5) = 4e-65
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 624 FLKRFF*SFGFVEDFVHLIISNLQSSWFSVLVNSVPAG 737
FL+R GF + FV LI+ ++S +SVL+ P G
Sbjct: 876 FLQRMMEVMGFPDRFVFLIMDCVKSVTYSVLLQGAPFG 913
>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1853
Score = 126 bits (316), Expect(4) = 1e-64
Identities = 69/167 (41%), Positives = 99/167 (59%), Gaps = 3/167 (1%)
Frame = +2
Query: 164 EVKEAVYLLDQDIALGTDGYTGRFYRACWDIIRGDLLNAV*EFFAGVPIPR-VASTLIVL 340
E+ A++ + A G DG+ GRFY+ W I++ D++ AV EFF+ +P V T IVL
Sbjct: 968 EIANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSLGTMPSGVNETAIVL 1027
Query: 341 LPKTSSPITFGYFRPISLCNFLNKIFPRILCVRMRDFMPSLISEEQSAFLQGRDISDNIL 520
+PKT P FRPISLCN + KI + L R+R + L+S+ QSAF+ GR I+DN L
Sbjct: 1028 IPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLVSQNQSAFVPGRLITDNAL 1087
Query: 521 VVQELVGHLNRRTRGRNL--ILKLDMMKAFDKVSWDFLKAVLLKFWF 655
+ E H+ R N KLD+ KA+D+V W+FL+ ++K F
Sbjct: 1088 IAFEYFHHIQRNKNPENAYSAYKLDLSKAYDRVDWEFLEQAMVKLGF 1134
Score = 86.3 bits (212), Expect(4) = 1e-64
Identities = 54/149 (36%), Positives = 76/149 (51%)
Frame = +1
Query: 730 LLVFFQASSGLKQGDPLSPYLFILVVEALSRGLSSLVQEGLMLPYSLPRGSKQISHLCFA 909
LL F S GL+QGDPLSP+LF+ V + LS L V +G M P + R + + HL FA
Sbjct: 1159 LLNTFAPSRGLRQGDPLSPFLFLFVADGLSFLLEEKVDQGAMNPIHICRHAPAVLHLLFA 1218
Query: 910 DDTVIFTVGLRASVYVLFDFLEQYETASGQTINRRKRSFVTSSRCPSARKRMLASLTGVT 1089
DDT +F V+ + LE Y + +GQ IN K S + P+A + + ++
Sbjct: 1219 DDTPLFFKAANDQAVVMKEVLETYASCTGQLINPSKCSIMFGQSSPTAVQNQIKQTLQIS 1278
Query: 1090 QGSLPFRYLGCQLFCGRPLRRYFQPLLDR 1176
S +YLG GR + FQ L +R
Sbjct: 1279 -NSFEDKYLGFPTPEGRMTKGKFQSLQER 1306
Score = 68.9 bits (167), Expect(4) = 1e-64
Identities = 31/94 (32%), Positives = 51/94 (54%)
Frame = +3
Query: 1197 WKGKLLSQGGRLILIRHVLASIPIYTMASMSIPNTILYQLERLYSRFFWGADGEISKRCW 1376
W K LS GG+ ILI+ VL ++P+Y M +P ++ +L +L F+WGA+ + + W
Sbjct: 1314 WGEKFLSTGGKEILIKAVLQAMPVYVMGLFKLPESVCEELTKLVRNFWWGAEKGMRRTHW 1373
Query: 1377 RSWDSLTFPVEENGLGVRGLKDIMTAFSCKLWWK 1478
+SWD L + G+G R + A + W+
Sbjct: 1374 KSWDCLIAQKLKGGMGFRDFRLFNQALLARQAWR 1407
Score = 35.8 bits (81), Expect(4) = 1e-64
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 1 DGDRNTSFFHSMVAARRAQLFISRIKDDSGRWLQNMDDIKNQASSFFENLLRHDGS 168
+GDRNT FFH+ R + I++++D +++ A+ +F+ L D S
Sbjct: 883 EGDRNTRFFHNKAVWRAKKNKITKLRDSDDTVHSTTKELERMATEYFQRLFTADPS 938
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 127 bits (319), Expect(4) = 3e-64
Identities = 71/167 (42%), Positives = 100/167 (59%), Gaps = 3/167 (1%)
Frame = +2
Query: 164 EVKEAVYLLDQDIALGTDGYTGRFYRACWDIIRGDLLNAV*EFFAGVPIPR-VASTLIVL 340
EVK+AV+ ++ A G DG+T FY + W II D+ + FF PR + T I L
Sbjct: 327 EVKDAVFSINASKAPGPDGFTAGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETHIRL 386
Query: 341 LPKTSSPITFGYFRPISLCNFLNKIFPRILCVRMRDFMPSLISEEQSAFLQGRDISDNIL 520
+PK P +RPI+LCN KI +I+ RM+ +P LISE QSAF+ GR ISDN+L
Sbjct: 387 IPKDLGPRKVADYRPIALCNIFYKIVAKIMTKRMQLILPKLISENQSAFVPGRVISDNVL 446
Query: 521 VVQELVGHLNRRTRGR--NLILKLDMMKAFDKVSWDFLKAVLLKFWF 655
+ E++ L + + ++ +K DM KA+D+V WDFLK VL +F F
Sbjct: 447 ITHEVLHFLRTSSAKKHCSMAVKTDMSKAYDRVEWDFLKKVLQRFGF 493
Score = 79.7 bits (195), Expect(4) = 3e-64
Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Frame = +1
Query: 757 GLKQGDPLSPYLFILVVEALSRGLSSLVQEGLMLP-YSLPRGSKQISHLCFADDTVIFTV 933
GL+QGDPLSP LFIL E LS GL + Q LP + +++HL FADDT+ F+
Sbjct: 527 GLRQGDPLSPCLFILCTEVLS-GLCTRAQRLRQLPGVRVSINGPRVNHLLFADDTMFFSK 585
Query: 934 GLRASVYVLFDFLEQYETASGQTINRRKRSFVTSSRCPSARKRMLASLTGVTQGSLPFRY 1113
S L + L +Y ASGQ+IN K S SS+ P + K + + + + +Y
Sbjct: 586 SDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTPRSVKGQVKRILKIRKEGGTGKY 645
Query: 1114 LGCQLFCGRPLRRYFQPLLDR 1176
LG GR R F ++D+
Sbjct: 646 LGLPEHFGRRKRDIFGAIIDK 666
Score = 76.6 bits (187), Expect(4) = 3e-64
Identities = 42/161 (26%), Positives = 81/161 (50%), Gaps = 14/161 (8%)
Frame = +3
Query: 1197 WKGKLLSQGGRLILIRHVLASIPIYTMASMSIPNTILYQLERLYSRFFWGADGEISKRCW 1376
W + LSQ G+ ++++ VLAS+P+Y+M+ +P+ + +++ L +RF+W ++ K W
Sbjct: 674 WASRFLSQAGKQVMLKAVLASMPLYSMSCFKLPSALCRKIQSLLTRFWWDTKPDVRKTSW 733
Query: 1377 RSWDSLTFPVEENGLGVRGLKDIMTAFSCKLWWKW---------KCGIGLWSH---YVRA 1520
+W LT P GLG R ++ + KL W+ + +G + H ++
Sbjct: 734 VAWSKLTNPKNAGGLGFRDIERCNDSLLAKLGWRLLNSPESLLSRILLGKYCHSSSFMEC 793
Query: 1521 SGLSR-SGAWRRILQVDEVMRQHTHVIVKDG-SCSFLYDNW 1637
S+ S WR I+ E++++ ++ +G S D W
Sbjct: 794 KLPSQPSHGWRSIIAGREILKEGLGWLITNGEKVSIWNDPW 834
Score = 32.0 bits (71), Expect(4) = 3e-64
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 4 GDRNTSFFHSMVAARRAQLFISRIKDDSGRWLQNMDDIKNQASSFFENL 150
GDRNT +FH++ RR Q ++ ++D +G I S +F+ +
Sbjct: 243 GDRNTGYFHAVTRNRRTQNRLTVMEDINGVAQHEEHQISQIISGYFQQI 291