BLASTX nr result

ID: Cephaelis21_contig00017624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017624
         (1594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, pu...   399   e-109
ref|XP_004145565.1| PREDICTED: splicing factor U2af small subuni...   391   e-106
ref|XP_002276502.1| PREDICTED: splicing factor U2af small subuni...   388   e-105
ref|XP_002307825.1| predicted protein [Populus trichocarpa] gi|2...   387   e-105
ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|2...   385   e-104

>ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
           communis] gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary
           factor, small subunit, putative [Ricinus communis]
          Length = 272

 Score =  399 bits (1026), Expect = e-109
 Identities = 199/271 (73%), Positives = 212/271 (78%), Gaps = 1/271 (0%)
 Frame = +3

Query: 123 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCARLHNRPTISPTLVLSNMYQRPDVITP 302
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRC+RLHNRPTISPTL+LSNMYQRPD+ITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 303 GVDPQGQPIDPGKIQDHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEED 482
           GVD QGQPIDP KIQ+HFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQF+EED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 483 QAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKMIG-XX 659
           QAAAALQ+LQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVK+IG   
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 660 XXXXXXXXXXXXXXXXXXXXXPPHYHRKERESNRDKDRDYRAXXXXXXXXXXXXXXXXXX 839
                                 P  HR+E+ ++R ++RDYR                   
Sbjct: 181 RRKLFGRYRGYRASRSRSRSVSPSRHRREKSNDR-RERDYRDRDYRGNGRRSGDRHDRRR 239

Query: 840 XXXXXXXXXPVREGSEERRARIEQWNREREE 932
                    PVREGSEERRARIEQWNREREE
Sbjct: 240 HGSPRRSRSPVREGSEERRARIEQWNREREE 270


>ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
           sativus] gi|449485076|ref|XP_004157064.1| PREDICTED:
           splicing factor U2af small subunit B-like [Cucumis
           sativus]
          Length = 276

 Score =  391 bits (1004), Expect = e-106
 Identities = 199/274 (72%), Positives = 210/274 (76%), Gaps = 4/274 (1%)
 Frame = +3

Query: 123 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCARLHNRPTISPTLVLSNMYQRPDVITP 302
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRC+RLHNRPTISPTL+LSNMYQRPD+ITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 303 GVDPQGQPIDPGKIQDHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEED 482
           GVD QGQPIDP KIQ+HFEDFYEDI+EELGKFGEIESLNVCDNLADHMIGNVYVQF+EED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 483 QAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKMIGXXX 662
           QAAAALQ+LQGRFYSGRPIIADFSPVTDFREATCRQ+EENNCNRGGYCNFMHVKMIG   
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180

Query: 663 XXXXXXXXXXXXXXXXXXXXPPHYHRKERE-SNRD-KDRDYRAXXXXXXXXXXXXXXXXX 836
                                   +RKE +   RD +DRDYR                  
Sbjct: 181 RRKLFGRYRGYRASRSRSRSLSPRNRKEHDRRERDYRDRDYRGNGRSKERHDRDGGRRRQ 240

Query: 837 XXXXXXXXXXP--VREGSEERRARIEQWNREREE 932
                     P  VREGSEERRARIEQWNREREE
Sbjct: 241 GSPRRSRSRSPVIVREGSEERRARIEQWNREREE 274


>ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
           vinifera] gi|359491881|ref|XP_003634337.1| PREDICTED:
           splicing factor U2af small subunit B isoform 2 [Vitis
           vinifera]
          Length = 272

 Score =  388 bits (997), Expect = e-105
 Identities = 196/271 (72%), Positives = 207/271 (76%), Gaps = 1/271 (0%)
 Frame = +3

Query: 123 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCARLHNRPTISPTLVLSNMYQRPDVITP 302
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRC+RLHNRPTISPTL+LSNMYQRPD+ITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 303 GVDPQGQPIDPGKIQDHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEED 482
           GVD QGQPIDP KIQ+HFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEE+
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEE 120

Query: 483 QAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKMIGXXX 662
           QAAAALQ+LQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVK+IG   
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 663 XXXXXXXXXXXXXXXXXXXXPPHYHRKERESNRDKDR-DYRAXXXXXXXXXXXXXXXXXX 839
                                   +R++ +  R  DR DYR                   
Sbjct: 181 RRKLFGRYSGYGRSRSRSRSLSPRYRRDSDRRRSGDRGDYRG-NGRRSGDKHGSDGGRRR 239

Query: 840 XXXXXXXXXPVREGSEERRARIEQWNREREE 932
                    PVREGSEERRARIE WNREREE
Sbjct: 240 HGSPRRSRSPVREGSEERRARIELWNREREE 270


>ref|XP_002307825.1| predicted protein [Populus trichocarpa] gi|222857274|gb|EEE94821.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  387 bits (995), Expect = e-105
 Identities = 197/276 (71%), Positives = 208/276 (75%), Gaps = 6/276 (2%)
 Frame = +3

Query: 123 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCARLHNRPTISPTLVLSNMYQRPDVITP 302
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRC+RLHNRPTISPTL+LSN Y RPD+ITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNTYHRPDMITP 60

Query: 303 GVDPQGQPIDPGKIQDHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEED 482
           GVD QGQP+DP KIQ+HFEDFYEDIFEEL KFGEIE+LNVCDNLADHMIGNVYVQFKEED
Sbjct: 61  GVDAQGQPLDPHKIQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFKEED 120

Query: 483 QAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKMIG--- 653
           QAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQ+EENNCNRGGYCNFMHVK+IG   
Sbjct: 121 QAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLIGKDL 180

Query: 654 ---XXXXXXXXXXXXXXXXXXXXXXXPPHYHRKERESNRDKDRDYRAXXXXXXXXXXXXX 824
                                        Y R+ER+  RD+DRDYR              
Sbjct: 181 RRKLFGRYRGYRVSRSRSRSVSPRRRDRDYDRRERD-YRDRDRDYRG-----NGRRNDRD 234

Query: 825 XXXXXXXXXXXXXXPVREGSEERRARIEQWNREREE 932
                         PVREGSEERRARIEQWNREREE
Sbjct: 235 GGRKRHGSPRRSRSPVREGSEERRARIEQWNREREE 270


>ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|222842340|gb|EEE79887.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  385 bits (990), Expect = e-104
 Identities = 197/279 (70%), Positives = 209/279 (74%), Gaps = 9/279 (3%)
 Frame = +3

Query: 123 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCARLHNRPTISPTLVLSNMYQRPDVITP 302
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRC+RLHNRPTISPTL+LSNMYQRPD+ITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 303 GVDPQGQPIDPGKIQDHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEED 482
           GVD QGQP+DP KIQ+HFE+FYEDIFEEL KFGEIESLNVCDNLADHMIGNVYV FKEED
Sbjct: 61  GVDAQGQPLDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEED 120

Query: 483 QAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKMIG--- 653
           QAAAALQ+LQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVK+IG   
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 654 ---XXXXXXXXXXXXXXXXXXXXXXXPPHYHRKE---RESNRDKDRDYRAXXXXXXXXXX 815
                                        Y R+E   R+ +RD+DRDYR           
Sbjct: 181 RRKLFGRYRGYRVSRSRSRSVSPRKRERDYDRRERDYRDRDRDRDRDYRG--------NG 232

Query: 816 XXXXXXXXXXXXXXXXXPVREGSEERRARIEQWNREREE 932
                             VREGSEERRARIEQWNREREE
Sbjct: 233 RRNDKYDREGGRKRHGSTVREGSEERRARIEQWNREREE 271


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