BLASTX nr result

ID: Cephaelis21_contig00017546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017546
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156001.1| PREDICTED: vacuolar protein sorting-associat...    99   5e-19
ref|XP_002307048.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002310532.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_004150931.1| PREDICTED: vacuolar protein sorting-associat...    97   2e-18
ref|NP_196488.1| vacuolar protein sorting-associated protein 20-...    94   1e-17

>ref|XP_004156001.1| PREDICTED: vacuolar protein sorting-associated protein 20 homolog
           2-like [Cucumis sativus]
          Length = 223

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 52/65 (80%), Positives = 58/65 (89%)
 Frame = -2

Query: 195 RKKTQEELLKQVKT*LIKVEQQLSDIKLASKQKAVFDSLKIGSNAIKAKQSEINLDNSQK 16
           +KK QEELLKQV T LI VEQQLSDI+LASKQKAVF+SLK G+NAIKA QSEIN+D+ QK
Sbjct: 64  KKKAQEELLKQVDTWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDDVQK 123

Query: 15  LMDDT 1
           LMDDT
Sbjct: 124 LMDDT 128


>ref|XP_002307048.1| predicted protein [Populus trichocarpa] gi|222856497|gb|EEE94044.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 51/65 (78%), Positives = 59/65 (90%)
 Frame = -2

Query: 195 RKKTQEELLKQVKT*LIKVEQQLSDIKLASKQKAVFDSLKIGSNAIKAKQSEINLDNSQK 16
           +KKTQEELLKQV T LI VEQQL+DI+LASKQKAVF+SLK G++AIKA QSE+NLD+ QK
Sbjct: 64  KKKTQEELLKQVDTWLINVEQQLADIELASKQKAVFESLKSGTDAIKAIQSEVNLDDVQK 123

Query: 15  LMDDT 1
           LMDDT
Sbjct: 124 LMDDT 128


>ref|XP_002310532.1| predicted protein [Populus trichocarpa] gi|222853435|gb|EEE90982.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 51/65 (78%), Positives = 59/65 (90%)
 Frame = -2

Query: 195 RKKTQEELLKQVKT*LIKVEQQLSDIKLASKQKAVFDSLKIGSNAIKAKQSEINLDNSQK 16
           +KKTQEELLKQV T LI VEQQL+DI+LASKQKAVF+SLK G++AIKA QSE+NLD+ QK
Sbjct: 64  KKKTQEELLKQVDTWLINVEQQLADIELASKQKAVFESLKSGTDAIKAIQSEVNLDDVQK 123

Query: 15  LMDDT 1
           LMDDT
Sbjct: 124 LMDDT 128


>ref|XP_004150931.1| PREDICTED: vacuolar protein sorting-associated protein 20 homolog
           2-like [Cucumis sativus]
          Length = 139

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/65 (78%), Positives = 57/65 (87%)
 Frame = -2

Query: 195 RKKTQEELLKQVKT*LIKVEQQLSDIKLASKQKAVFDSLKIGSNAIKAKQSEINLDNSQK 16
           +KK QEELLKQV   LI VEQQLSDI+LASKQKAVF+SLK G+NAIKA QSEIN+D+ QK
Sbjct: 64  KKKAQEELLKQVDAWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINIDDVQK 123

Query: 15  LMDDT 1
           LMDDT
Sbjct: 124 LMDDT 128


>ref|NP_196488.1| vacuolar protein sorting-associated protein 20-2 [Arabidopsis
           thaliana] gi|75173205|sp|Q9FY89.1|VP202_ARATH RecName:
           Full=Vacuolar protein sorting-associated protein 20
           homolog 2; Short=AtVPS20-2; AltName: Full=Charged
           multivesicular body protein 6 homolog 2; AltName:
           Full=ESCRT-III complex subunit VPS20 homolog 2
           gi|9955513|emb|CAC05452.1| putative protein [Arabidopsis
           thaliana] gi|34365667|gb|AAQ65145.1| At5g09260
           [Arabidopsis thaliana] gi|51969450|dbj|BAD43417.1|
           unknown protein [Arabidopsis thaliana]
           gi|332003983|gb|AED91366.1| vacuolar protein
           sorting-associated protein 20-2 [Arabidopsis thaliana]
          Length = 216

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/65 (75%), Positives = 57/65 (87%)
 Frame = -2

Query: 195 RKKTQEELLKQVKT*LIKVEQQLSDIKLASKQKAVFDSLKIGSNAIKAKQSEINLDNSQK 16
           +K+TQEELLKQV   LI VEQQL+DI+L SKQKAVF+SLK G+NAIKA QSE+NLD+ QK
Sbjct: 64  KKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNNAIKAIQSEVNLDDVQK 123

Query: 15  LMDDT 1
           LMDDT
Sbjct: 124 LMDDT 128


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