BLASTX nr result

ID: Cephaelis21_contig00017543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017543
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF81334.1|AC007767_14 Contains similarity to a hypothetical ...    72   5e-11
ref|NP_564398.1| putative FBD-associated F-box protein [Arabidop...    72   5e-11
ref|NP_680443.1| FBD domain-containing protein [Arabidopsis thal...    64   1e-08
gb|ABK28761.1| unknown [Arabidopsis thaliana]                          64   1e-08
ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>gb|AAF81334.1|AC007767_14 Contains similarity to a hypothetical protein T25K17.150 gi|7487424
           from Arabidopsis thaliana BAC T25K17 gb|AL049171
           [Arabidopsis thaliana]
          Length = 536

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
 Frame = +2

Query: 8   CDCSFEWRSL-MELLVCSVKLEVLDITFIRI-GEHTDRACWRDPKQIPRCMAHSLTRVSF 181
           C C  EW +L M +L  S KL  L +    +   H  R CW +P  +P C+  SL  + +
Sbjct: 417 CTCETEWLNLLMCVLRDSPKLRELKLVKNHVYRSHQPRPCWNEPSAVPECLLTSLETLEW 476

Query: 182 SGFDGLEDEMAMIRFILKHALVMRRVDLRSTAGPGDFKKKFGVLKKISMFPRASCTCKIS 361
             ++G E+E  +  FIL+    +++V + S +   D  KKF +LK++S+  R S TC+I+
Sbjct: 477 VKYEGTEEEKEVAAFILRSGSCLKKVTISSKS--TDINKKFEMLKELSLLFRRSPTCQIA 534

Query: 362 F 364
           F
Sbjct: 535 F 535


>ref|NP_564398.1| putative FBD-associated F-box protein [Arabidopsis thaliana]
           gi|302425238|sp|Q9LQM1.2|FBD39_ARATH RecName:
           Full=Probable FBD-associated F-box protein At1g32375
           gi|332193353|gb|AEE31474.1| putative FBD-associated
           F-box protein [Arabidopsis thaliana]
          Length = 422

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
 Frame = +2

Query: 8   CDCSFEWRSL-MELLVCSVKLEVLDITFIRI-GEHTDRACWRDPKQIPRCMAHSLTRVSF 181
           C C  EW +L M +L  S KL  L +    +   H  R CW +P  +P C+  SL  + +
Sbjct: 303 CTCETEWLNLLMCVLRDSPKLRELKLVKNHVYRSHQPRPCWNEPSAVPECLLTSLETLEW 362

Query: 182 SGFDGLEDEMAMIRFILKHALVMRRVDLRSTAGPGDFKKKFGVLKKISMFPRASCTCKIS 361
             ++G E+E  +  FIL+    +++V + S +   D  KKF +LK++S+  R S TC+I+
Sbjct: 363 VKYEGTEEEKEVAAFILRSGSCLKKVTISSKS--TDINKKFEMLKELSLLFRRSPTCQIA 420

Query: 362 F 364
           F
Sbjct: 421 F 421


>ref|NP_680443.1| FBD domain-containing protein [Arabidopsis thaliana]
           gi|91807052|gb|ABE66253.1| hypothetical protein
           At5g56325 [Arabidopsis thaliana]
           gi|332009366|gb|AED96749.1| FBD domain-containing
           protein [Arabidopsis thaliana]
          Length = 264

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
 Frame = +2

Query: 8   CDCSFEWRSL-MELLVCSVKLEVLDITFIR-IGEHTDRACWRDPKQIPRCMAHSLTRVSF 181
           C C  EW +L M LL  S  L VL+I  +  +  +  R CW +P  IP C+ H+L    +
Sbjct: 144 CTCETEWINLLMRLLRNSPSLRVLEIEQVHYLRYYQPRPCWSEPSSIPECLTHNLETFKW 203

Query: 182 SGFDGLEDEMAMIRFILKHALVMRRVDL---RSTAGPGDFKKKFGVLKKISMFPRASCTC 352
             + G E+E  +  FIL+ ++ +++  +   RS        +K  + K++S+ P  S  C
Sbjct: 204 EHYYGAEEEKEVAAFILRSSICLKKATIILHRSIV----HDEKLEMNKELSLLPICSPIC 259

Query: 353 KISFS 367
           +++FS
Sbjct: 260 QLAFS 264


>gb|ABK28761.1| unknown [Arabidopsis thaliana]
          Length = 265

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
 Frame = +2

Query: 8   CDCSFEWRSL-MELLVCSVKLEVLDITFIR-IGEHTDRACWRDPKQIPRCMAHSLTRVSF 181
           C C  EW +L M LL  S  L VL+I  +  +  +  R CW +P  IP C+ H+L    +
Sbjct: 144 CTCETEWINLLMRLLRNSPSLRVLEIEQVHYLRYYQPRPCWSEPSSIPECLTHNLETFKW 203

Query: 182 SGFDGLEDEMAMIRFILKHALVMRRVDL---RSTAGPGDFKKKFGVLKKISMFPRASCTC 352
             + G E+E  +  FIL+ ++ +++  +   RS        +K  + K++S+ P  S  C
Sbjct: 204 EHYYGAEEEKEVAAFILRSSICLKKATIILHRSIV----HDEKLEMNKELSLLPICSPIC 259

Query: 353 KISFS 367
           +++FS
Sbjct: 260 QLAFS 264


>ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|222859972|gb|EEE97519.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   IQCDCSFEWRSLMELLVCSVKLEVLDITFIRIGEHTDRACWRDPKQIPRCMAHSLTRVSF 181
           I+   +  W  L E+L CS KLEV  I +    E T R  WR+P+ +PRC+  SL  + +
Sbjct: 344 IEASGNDRWLVLHEILKCSPKLEVF-ILYKDSTEKTPR--WRNPEFVPRCLRSSLKVIEY 400

Query: 182 SGFDGLEDEMAMIRFILKHALVMRRVDLR-STAGPGDFKKKFGVLKKISMFPRASCTCKI 358
            GF+    E+ M  +++K+ALV+ ++ +        DFK++  V ++++   R S  C+I
Sbjct: 401 VGFESELGEIEMAEYLIKNALVLEKMTIEYGWKMIHDFKER--VAERLTECRRGSTACRI 458

Query: 359 SFS 367
            FS
Sbjct: 459 VFS 461


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