BLASTX nr result
ID: Cephaelis21_contig00017518
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00017518
(2282 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi... 614 e-173
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,... 583 e-164
ref|XP_002321560.1| predicted protein [Populus trichocarpa] gi|2... 575 e-161
ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containi... 563 e-158
sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-c... 548 e-153
>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 614 bits (1583), Expect = e-173
Identities = 301/491 (61%), Positives = 381/491 (77%), Gaps = 10/491 (2%)
Frame = +3
Query: 273 QMHKIVPTTKTTNSFLKTPTSFH--------FSTQPPSSTAVMVDPNYITNLILEMNPEN 428
++++ V TKT FL H F TQ S+ I L+LE +P++
Sbjct: 5 KINRRVTKTKTNTVFLHLSPPLHRFFLSCPNFITQSTSALDTAAAATDIATLVLESDPKS 64
Query: 429 LSQNLPTLA-HWTPDLVHRILKGLWNHGPKALEFFKILDTHQSYSHSATAFDYTIDIAGR 605
L +L L +TP+LV ++LK LW HGPKAL+FFK L+ H SY+HSA++FD+ IDIAGR
Sbjct: 65 LRGSLHGLQLQFTPELVDKVLKRLWFHGPKALQFFKHLEYHPSYAHSASSFDHAIDIAGR 124
Query: 606 MRDYKTIWTLVDQMRVRKLGPSPKTLAIILERYVSSGKADKAVDIFLSMHNHGCPQNLSS 785
MRDYKT+W LV +MR R++GPS KT AII ER+V++GK D+A+ +FLSM HGCPQ+L S
Sbjct: 125 MRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHS 184
Query: 786 FNAFLDVLCKAKKADMAYN-LFKLFGRKFRPDMISYNIIANGFCLIKRTPKALEILKEMV 962
FN LD+LCK+K+ +MAYN LFK+ KF+ D++SYNIIANG+CLIKRTPKALE+LKEMV
Sbjct: 185 FNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMV 244
Query: 963 ERGLEPNVMTYNVMLKGFFRSGQIKKAWEFFLQMKRRKCQIDVVTYTTMVHGFGVAGDVG 1142
ERGL P + TYN++LKG+FR+GQ+K+AWEFFLQMK R+ +IDVVTYTTMVHGFGV G++
Sbjct: 245 ERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIK 304
Query: 1143 RSLKLFNEMVGNGVLPSVATYNALIQVLCKKDNVENAILVLEEMMKKGYVPNVTTHNVII 1322
R+ K+FNEMVG G+LPS ATYNA+IQVLCKKD+VENA+L+ EEM+KKGYVPN+TT+NV+I
Sbjct: 305 RARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVI 364
Query: 1323 RGLCHVGKMERAMEYIDRMKDSECAPNVKTYNLVIQYYCDAGDVENGLELFEKMGRAHFL 1502
RGL H G M++AME+I+RMK C PNV+TYN+ I+Y+CDAGDVE GL +FEKMG+ L
Sbjct: 365 RGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQGS-L 423
Query: 1503 PNLDTYNILISSMFVRKKSDDLVVAGKLLIEMTDRGFLPQXXXXXXXXXXXXXXXNQDFA 1682
PNLDTYN+LIS+MFVRKKS+DLVVAGKLL+EM DRGF+P+ NQ FA
Sbjct: 424 PNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTGNQAFA 483
Query: 1683 REILRLQSKFG 1715
+EILRLQSK G
Sbjct: 484 KEILRLQSKCG 494
Score = 95.1 bits (235), Expect = 7e-17
Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 4/266 (1%)
Frame = +3
Query: 510 PKALEFFKILDTHQSYSHSATAFDYTIDIAGRMRDYKTIWTLVDQMRVRKLGPSPKTLAI 689
PKALE K + + + + T ++ + R K W QM+ R++ T
Sbjct: 234 PKALEVLKEM-VERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTT 292
Query: 690 ILERYVSSGKADKAVDIFLSMHNHGCPQNLSSFNAFLDVLCKAKKADMAYNLFKLFGRK- 866
++ + G+ +A +F M G + +++NA + VLCK + A +F+ +K
Sbjct: 293 MVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKG 352
Query: 867 FRPDMISYNIIANGFCLIKRTPKALEILKEMVERGLEPNVMTYNVMLKGFFRSGQIKKAW 1046
+ P++ +YN++ G KA+E ++ M G EPNV TYNV ++ F +G ++K
Sbjct: 353 YVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGL 412
Query: 1047 EFFLQMKRRKCQIDVVTYTTMVHGFGV---AGDVGRSLKLFNEMVGNGVLPSVATYNALI 1217
F +M + ++ TY ++ V + D+ + KL EMV G +P T+N ++
Sbjct: 413 SMFEKMGQGSLP-NLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVL 471
Query: 1218 QVLCKKDNVENAILVLEEMMKKGYVP 1295
L N A +L K G +P
Sbjct: 472 NGLLLTGNQAFAKEILRLQSKCGRLP 497
>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 482
Score = 583 bits (1503), Expect = e-164
Identities = 279/459 (60%), Positives = 358/459 (77%), Gaps = 2/459 (0%)
Frame = +3
Query: 345 STQPPSSTAVMVDPNYITNLILEM-NPENLSQNLPTLA-HWTPDLVHRILKGLWNHGPKA 518
+T PP +T + LIL N + L+++L + + WTP LV+ ILK LWNHGPKA
Sbjct: 23 TTSPPEATTLAA-------LILNSTNSQTLAESLHSPSIQWTPQLVNTILKRLWNHGPKA 75
Query: 519 LEFFKILDTHQSYSHSATAFDYTIDIAGRMRDYKTIWTLVDQMRVRKLGPSPKTLAIILE 698
L FFKIL H SY H A++FD+ IDI R+RD++T+W LV +MR +LGPSP+T AII E
Sbjct: 76 LHFFKILSHHPSYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAE 135
Query: 699 RYVSSGKADKAVDIFLSMHNHGCPQNLSSFNAFLDVLCKAKKADMAYNLFKLFGRKFRPD 878
RY + GK +AV +F+SMH +GC Q+LSSFN LDVLCK+K+ +MAYNLFK KF+ D
Sbjct: 136 RYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFKAD 195
Query: 879 MISYNIIANGFCLIKRTPKALEILKEMVERGLEPNVMTYNVMLKGFFRSGQIKKAWEFFL 1058
+SYNII NG+CLIKRTPKALE+LKEMVERGL PN+ TYN+ML G+FR+GQ +AW FFL
Sbjct: 196 CVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFL 255
Query: 1059 QMKRRKCQIDVVTYTTMVHGFGVAGDVGRSLKLFNEMVGNGVLPSVATYNALIQVLCKKD 1238
+MK+RKC IDVVTYT+++HG GV G++ R+ +FN+MV +GVLPSVAT+NALIQ+LCKKD
Sbjct: 256 EMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKD 315
Query: 1239 NVENAILVLEEMMKKGYVPNVTTHNVIIRGLCHVGKMERAMEYIDRMKDSECAPNVKTYN 1418
+VENAIL+ EEM+K+GYVPN T+N++IRGLCHVG+M+RAME ++RM+D +C PNV+TYN
Sbjct: 316 SVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYN 375
Query: 1419 LVIQYYCDAGDVENGLELFEKMGRAHFLPNLDTYNILISSMFVRKKSDDLVVAGKLLIEM 1598
++I+Y+CDAG++E GL+LF+KMG LPNLDTYNILI+SMFVRK SD+L+VAGKLL+EM
Sbjct: 376 ILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEM 435
Query: 1599 TDRGFLPQXXXXXXXXXXXXXXXNQDFAREILRLQSKFG 1715
DRGFLP+ NQDFA+EIL LQ G
Sbjct: 436 VDRGFLPRKLTFNRVLDGLLLTGNQDFAKEILSLQGGCG 474
Score = 107 bits (268), Expect = 1e-20
Identities = 70/266 (26%), Positives = 129/266 (48%), Gaps = 4/266 (1%)
Frame = +3
Query: 510 PKALEFFKILDTHQSYSHSATAFDYTIDIAGRMRDYKTIWTLVDQMRVRKLGPSPKTLAI 689
PKALE K + + + + T ++ ++ R W +M+ RK T
Sbjct: 213 PKALEMLKEM-VERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTS 271
Query: 690 ILERYVSSGKADKAVDIFLSMHNHGCPQNLSSFNAFLDVLCKAKKADMAYNLFK-LFGRK 866
++ G+ +A ++F M G ++++FNA + +LCK + A +F+ + R
Sbjct: 272 VIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRG 331
Query: 867 FRPDMISYNIIANGFCLIKRTPKALEILKEMVERGLEPNVMTYNVMLKGFFRSGQIKKAW 1046
+ P+ I+YN++ G C + +A+E+++ M + EPNV TYN++++ F +G+I+K
Sbjct: 332 YVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGL 391
Query: 1047 EFFLQMKRRKCQIDVVTYTTMVHGFGVAGDVGRSL---KLFNEMVGNGVLPSVATYNALI 1217
+ F +M C ++ TY +++ V + L KL EMV G LP T+N ++
Sbjct: 392 DLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRVL 451
Query: 1218 QVLCKKDNVENAILVLEEMMKKGYVP 1295
L N + A +L G +P
Sbjct: 452 DGLLLTGNQDFAKEILSLQGGCGRLP 477
>ref|XP_002321560.1| predicted protein [Populus trichocarpa] gi|222868556|gb|EEF05687.1|
predicted protein [Populus trichocarpa]
Length = 491
Score = 575 bits (1481), Expect = e-161
Identities = 281/479 (58%), Positives = 363/479 (75%), Gaps = 5/479 (1%)
Frame = +3
Query: 294 TTKTTNSFLKTPTSFHFSTQ---PPSSTAVMVDPNYITNLILEMNPENLSQNL--PTLAH 458
T ++ +L+ P S+ F+T PP + T ++ NP+ L+Q L PT+
Sbjct: 6 TNRSLLLYLRPPKSYPFTTATPTPPPPQQPLEAAALATLILTSSNPQALAQTLHSPTI-Q 64
Query: 459 WTPDLVHRILKGLWNHGPKALEFFKILDTHQSYSHSATAFDYTIDIAGRMRDYKTIWTLV 638
WTP LV+ ILK LWN GPKAL+FF +L H SYSH +++D+ IDI+ R+RD ++ +LV
Sbjct: 65 WTPQLVNTILKRLWNDGPKALQFFNLLSHHPSYSHHPSSYDHAIDISARLRDSPSLRSLV 124
Query: 639 DQMRVRKLGPSPKTLAIILERYVSSGKADKAVDIFLSMHNHGCPQNLSSFNAFLDVLCKA 818
+MR +LGP+PKT AII ERY S+GK +AV +FLSMH GC Q+L SFN LDVLCK+
Sbjct: 125 YRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKS 184
Query: 819 KKADMAYNLFKLFGRKFRPDMISYNIIANGFCLIKRTPKALEILKEMVERGLEPNVMTYN 998
K+ +MAYNLFK+F KFR D +SYN++ NG+CLIKRT KALE+LKEMV+RGL PN+ +YN
Sbjct: 185 KRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYN 244
Query: 999 VMLKGFFRSGQIKKAWEFFLQMKRRKCQIDVVTYTTMVHGFGVAGDVGRSLKLFNEMVGN 1178
MLKG+FR+GQI +AW+FFL+MK+R C+IDV+TYTT++HGFGVAG++ R+ K+F+ MV
Sbjct: 245 TMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKK 304
Query: 1179 GVLPSVATYNALIQVLCKKDNVENAILVLEEMMKKGYVPNVTTHNVIIRGLCHVGKMERA 1358
GVLPSVATYNA IQVLCKKDNV+NAI++ EEM+ KGYVPN T+N++IRGLCH G+MERA
Sbjct: 305 GVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERA 364
Query: 1359 MEYIDRMKDSECAPNVKTYNLVIQYYCDAGDVENGLELFEKMGRAHFLPNLDTYNILISS 1538
ME++ RMKD C PNV+TYNLVI+Y+CD G+++ L+LF+KM LPNLDTYNILIS+
Sbjct: 365 MEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISA 424
Query: 1539 MFVRKKSDDLVVAGKLLIEMTDRGFLPQXXXXXXXXXXXXXXXNQDFAREILRLQSKFG 1715
MFVRKKSDDL+VAG LLIEM DRGF+P+ NQ FA+EILRLQS+ G
Sbjct: 425 MFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGNQGFAKEILRLQSRCG 483
>ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 563 bits (1451), Expect = e-158
Identities = 272/445 (61%), Positives = 353/445 (79%), Gaps = 4/445 (0%)
Frame = +3
Query: 393 ITNLILEMNPENLSQNL--PTLAHWTPDLVHRILKGLWNHGPKALEFFKILDTHQ-SYSH 563
I L+LE +P +S+ L PT+ WTPDLV++++K LWNHGPKAL+FFK LD H SY+H
Sbjct: 44 IAKLVLESDPRTVSEALTKPTI-QWTPDLVNKVMKRLWNHGPKALQFFKHLDRHHPSYTH 102
Query: 564 SATAFDYTIDIAGRMRDYKTIWTLVDQMRVRKLGPSPKTLAIILERYVSSGKADKAVDIF 743
S ++FD+ +DIA RMRD+ + W LV +MR +LGPSPKTLAI+ ERY S+GK +AV F
Sbjct: 103 SPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRTF 162
Query: 744 LSMHNHGCPQNLSSFNAFLDVLCKAKKADMAYNLFKLFGRKFRPDMISYNIIANGFCLIK 923
LSM HG Q+L SFN LD+LCK+K+ + A++L K +FRPD ++YNI+ANG+CLIK
Sbjct: 163 LSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSRFRPDTVTYNILANGYCLIK 222
Query: 924 RTPKALEILKEMVERGLEPNVMTYNVMLKGFFRSGQIKKAWEFFLQMKRRKCQIDVVTYT 1103
RTP AL +LKEMV+RG+EP ++TYN MLKG+FRS QIK+AWEF+L+MK+RKC+IDVVTYT
Sbjct: 223 RTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYT 282
Query: 1104 TMVHGFGVAGDVGRSLKLFNEMVGNGVLPSVATYNALIQVLCKKDNVENAILVLEEMMKK 1283
T++HGFGVAGDV ++ ++F+EMV GV+P+VATYNALIQVLCKKD+VENA++V EEM ++
Sbjct: 283 TVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMARE 342
Query: 1284 GY-VPNVTTHNVIIRGLCHVGKMERAMEYIDRMKDSECAPNVKTYNLVIQYYCDAGDVEN 1460
G VPNV T+NV+IRGLCHVG MERA+ +++RM + V+TYN+VI+Y+CDAG+VE
Sbjct: 343 GVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEK 402
Query: 1461 GLELFEKMGRAHFLPNLDTYNILISSMFVRKKSDDLVVAGKLLIEMTDRGFLPQXXXXXX 1640
LE+F KMG LPNLDTYN+LIS+MFVRKKS+DLVVAGKLL++M DRGFLP+
Sbjct: 403 ALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTFNR 462
Query: 1641 XXXXXXXXXNQDFAREILRLQSKFG 1715
NQDFA+EILR+QS+ G
Sbjct: 463 VLNGLVITGNQDFAKEILRMQSRCG 487
>sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial; AltName: Full=Protein ORGANELLE TRANSCRIPT
PROCESSING DEFECT 43; Flags: Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535
DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical
protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 548 bits (1412), Expect = e-153
Identities = 257/420 (61%), Positives = 329/420 (78%), Gaps = 1/420 (0%)
Frame = +3
Query: 459 WTPDLVHRILKGLWNHGPKALEFFKILDTH-QSYSHSATAFDYTIDIAGRMRDYKTIWTL 635
WTP+LV+ +LK LWNHGPKAL+FF LD H + Y H A++FD IDIA R+ + T+W+L
Sbjct: 54 WTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSL 113
Query: 636 VDQMRVRKLGPSPKTLAIILERYVSSGKADKAVDIFLSMHNHGCPQNLSSFNAFLDVLCK 815
+ +MR ++GPSPKT AI+ ERY S+GK DKAV +FL+MH HGC Q+L+SFN LDVLCK
Sbjct: 114 IHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCK 173
Query: 816 AKKADMAYNLFKLFGRKFRPDMISYNIIANGFCLIKRTPKALEILKEMVERGLEPNVMTY 995
+K+ + AY LF+ +F D ++YN+I NG+CLIKRTPKALE+LKEMVERG+ PN+ TY
Sbjct: 174 SKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTY 233
Query: 996 NVMLKGFFRSGQIKKAWEFFLQMKRRKCQIDVVTYTTMVHGFGVAGDVGRSLKLFNEMVG 1175
N MLKGFFR+GQI+ AWEFFL+MK+R C+IDVVTYTT+VHGFGVAG++ R+ +F+EM+
Sbjct: 234 NTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIR 293
Query: 1176 NGVLPSVATYNALIQVLCKKDNVENAILVLEEMMKKGYVPNVTTHNVIIRGLCHVGKMER 1355
GVLPSVATYNA+IQVLCKKDNVENA+++ EEM+++GY PNVTT+NV+IRGL H G+ R
Sbjct: 294 EGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSR 353
Query: 1356 AMEYIDRMKDSECAPNVKTYNLVIQYYCDAGDVENGLELFEKMGRAHFLPNLDTYNILIS 1535
E + RM++ C PN +TYN++I+YY + +VE L LFEKMG LPNLDTYNILIS
Sbjct: 354 GEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILIS 413
Query: 1536 SMFVRKKSDDLVVAGKLLIEMTDRGFLPQXXXXXXXXXXXXXXXNQDFAREILRLQSKFG 1715
MFVRK+S+D+VVAGKLL+EM +RGF+P+ NQ FA+EILRLQSK G
Sbjct: 414 GMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSG 473