BLASTX nr result

ID: Cephaelis21_contig00017501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017501
         (1084 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284361.1| PREDICTED: cytochrome b6-f complex iron-sulf...   351   2e-94
gb|ADU05416.1| chloroplast Rieske-type ion-sulfur protein [Citru...   348   2e-93
sp|P30361.2|UCRIA_TOBAC RecName: Full=Cytochrome b6-f complex ir...   346   7e-93
sp|Q69GY7.1|UCRIA_SOLTU RecName: Full=Cytochrome b6-f complex ir...   345   9e-93
gb|ACU14088.1| unknown [Glycine max]                                  345   1e-92

>ref|XP_002284361.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic isoform 1 [Vitis vinifera]
           gi|147826727|emb|CAN66108.1| hypothetical protein
           VITISV_020089 [Vitis vinifera]
           gi|302143099|emb|CBI20394.3| unnamed protein product
           [Vitis vinifera]
          Length = 228

 Score =  351 bits (900), Expect = 2e-94
 Identities = 169/228 (74%), Positives = 184/228 (80%)
 Frame = +2

Query: 104 MASSTLSPVTPSQLCSSKSSMCCPSQALFVKPMRSGQSIGKDKRMKVSCMATSIPADRVP 283
           MA+STLSP T SQLCS ++ +  PS AL  K  R+   +GK K +K+ C ATSIPADRVP
Sbjct: 1   MAASTLSPATSSQLCSIRNGVLSPSHALLPKLTRTSPFVGKGKGLKIKCQATSIPADRVP 60

Query: 284 DMGKRQLMNWLLLGAVSLPTAIMXXXXXXXXXXXXXXXXXXXXXAKDALGNDVIATEWLK 463
           DMGKR+LMN LLLGA+SLP+A M                     AKDALGNDVIA EWLK
Sbjct: 61  DMGKRKLMNLLLLGAISLPSAGMLIPYATFFAPPGTGSAGGGIVAKDALGNDVIADEWLK 120

Query: 464 KHGPGDRTLTQGLKGDPTYLVVENDRTLATYGINGVCTHLGCVVPWNAAENRFICPCHGS 643
            HGPGDRTLTQGLKGDPTYLVVEND+TLATYGIN VCTHLGCVVPWNAAEN+FICPCHGS
Sbjct: 121 THGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGS 180

Query: 644 QYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 787
           QYNNQG+VVRGPAPLSLALAHADIDDGKV+FVPWVETDFRTGEDPWWA
Sbjct: 181 QYNNQGRVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGEDPWWA 228


>gb|ADU05416.1| chloroplast Rieske-type ion-sulfur protein [Citrullus lanatus]
          Length = 227

 Score =  348 bits (892), Expect = 2e-93
 Identities = 167/228 (73%), Positives = 185/228 (81%)
 Frame = +2

Query: 104 MASSTLSPVTPSQLCSSKSSMCCPSQALFVKPMRSGQSIGKDKRMKVSCMATSIPADRVP 283
           MASSTLS  TPSQLC+S+S++ CPSQAL  KP ++ Q   K K +K+SC ATSIPADRVP
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKP-KNTQMGAKGKEVKISCQATSIPADRVP 59

Query: 284 DMGKRQLMNWLLLGAVSLPTAIMXXXXXXXXXXXXXXXXXXXXXAKDALGNDVIATEWLK 463
           DMGKR+ MN LLLGA+ LPTA M                     AKDALGNDV+A EWLK
Sbjct: 60  DMGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLK 119

Query: 464 KHGPGDRTLTQGLKGDPTYLVVENDRTLATYGINGVCTHLGCVVPWNAAENRFICPCHGS 643
            HGPGDRTLTQGL+GDPTYLVVE D+TLATYGIN VCTHLGCVVPWNAAEN+FICPCHGS
Sbjct: 120 AHGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGS 179

Query: 644 QYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 787
           QYN+QG+VVRGPAPLSLAL HAD+DDGKVVFVPWVETDFRTGE+PWWA
Sbjct: 180 QYNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227


>sp|P30361.2|UCRIA_TOBAC RecName: Full=Cytochrome b6-f complex iron-sulfur subunit 1,
           chloroplastic; AltName:
           Full=Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 1; AltName: Full=Rieske iron-sulfur
           protein 1; Short=ISP 1; Short=RISP 1; Flags: Precursor
           gi|19995|emb|CAA46808.1| Rieske FeS [Nicotiana tabacum]
          Length = 228

 Score =  346 bits (887), Expect = 7e-93
 Identities = 177/230 (76%), Positives = 187/230 (81%), Gaps = 2/230 (0%)
 Frame = +2

Query: 104 MASSTLSPVTPSQLCSSKSSMCCPSQALFVKPMR-SGQSIGKDKRMKVSCMATSIPAD-R 277
           MASSTLSPVT  QLCSSKS +   SQ L VKPM+ +   +GKDKRMKV CMATSIPAD R
Sbjct: 1   MASSTLSPVT--QLCSSKSGLSSVSQCLLVKPMKINSHGLGKDKRMKVKCMATSIPADDR 58

Query: 278 VPDMGKRQLMNWLLLGAVSLPTAIMXXXXXXXXXXXXXXXXXXXXXAKDALGNDVIATEW 457
           VPDM KR LMN LLLGA+SLPTA M                     AKDALGNDVIA+EW
Sbjct: 59  VPDMEKRNLMNLLLLGALSLPTAGMLVPYGTFFVPPGSGGGSGGTPAKDALGNDVIASEW 118

Query: 458 LKKHGPGDRTLTQGLKGDPTYLVVENDRTLATYGINGVCTHLGCVVPWNAAENRFICPCH 637
           LK H PG+RTLTQGLKGDPTYLVVEND TLATYGIN VCTHLGCVVP+NAAEN+FICPCH
Sbjct: 119 LKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCH 178

Query: 638 GSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 787
           GSQYNNQG+VVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA
Sbjct: 179 GSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 228


>sp|Q69GY7.1|UCRIA_SOLTU RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic; AltName:
           Full=Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein; AltName: Full=Rieske iron-sulfur
           protein; Short=ISP; Short=RISP; Flags: Precursor
           gi|37222949|gb|AAQ90151.1| putative Rieske Fe-S protein
           precursor [Solanum tuberosum]
          Length = 230

 Score =  345 bits (886), Expect = 9e-93
 Identities = 173/230 (75%), Positives = 182/230 (79%), Gaps = 2/230 (0%)
 Frame = +2

Query: 104 MASSTLSPVTPSQLCSSKSSMCCPSQALFVKPMR-SGQSIGKDKRMKVSCMATSIPAD-R 277
           MASSTLS VTPSQLCSSKS +   SQAL VKPM+ +G  +GKDKRMK  CMA SIPAD R
Sbjct: 1   MASSTLSHVTPSQLCSSKSGVSSVSQALLVKPMKINGHGMGKDKRMKAKCMAASIPADDR 60

Query: 278 VPDMGKRQLMNWLLLGAVSLPTAIMXXXXXXXXXXXXXXXXXXXXXAKDALGNDVIATEW 457
           VPDM KR LMN LLLGA++LPT  M                     AKDA GNDV+ TEW
Sbjct: 61  VPDMEKRNLMNLLLLGALALPTGGMLVPYATFFAPPGSGGGSSGTIAKDANGNDVVVTEW 120

Query: 458 LKKHGPGDRTLTQGLKGDPTYLVVENDRTLATYGINGVCTHLGCVVPWNAAENRFICPCH 637
           LK H PG RTLTQGLKGDPTYLVVEND TLATYGIN VCTHLGCVVPWN AEN+FICPCH
Sbjct: 121 LKTHSPGTRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPWNTAENKFICPCH 180

Query: 638 GSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 787
           GSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTG+ PWWA
Sbjct: 181 GSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGDSPWWA 230


>gb|ACU14088.1| unknown [Glycine max]
          Length = 227

 Score =  345 bits (884), Expect = 1e-92
 Identities = 167/228 (73%), Positives = 182/228 (79%)
 Frame = +2

Query: 104 MASSTLSPVTPSQLCSSKSSMCCPSQALFVKPMRSGQSIGKDKRMKVSCMATSIPADRVP 283
           MAS+TLSP TPSQLCS KS +  PSQAL VKP++  Q +GK K M+++C ATSIPADRVP
Sbjct: 1   MASTTLSPTTPSQLCSGKSGIFSPSQALLVKPVKR-QMMGKSKGMRIACQATSIPADRVP 59

Query: 284 DMGKRQLMNWLLLGAVSLPTAIMXXXXXXXXXXXXXXXXXXXXXAKDALGNDVIATEWLK 463
           DMGKRQLMN LLLGA+SLP+A M                     AKDA+GNDVIA  WLK
Sbjct: 60  DMGKRQLMNLLLLGAISLPSAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLK 119

Query: 464 KHGPGDRTLTQGLKGDPTYLVVENDRTLATYGINGVCTHLGCVVPWNAAENRFICPCHGS 643
            HGPGDRTL QGLKGDPTYLVVE DRTLATY IN VCTHLGCVVPWN AEN+FICPCHGS
Sbjct: 120 AHGPGDRTLAQGLKGDPTYLVVEKDRTLATYAINAVCTHLGCVVPWNQAENKFICPCHGS 179

Query: 644 QYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 787
           QYN+QG+V RGPAPLSLALAH DIDDGKVVFVPWVETDFRTG+ PWWA
Sbjct: 180 QYNDQGRVARGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDAPWWA 227


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