BLASTX nr result

ID: Cephaelis21_contig00017492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017492
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_174336.1| DNA-damage-repair/toleration protein DRT111 [Ar...    92   6e-17
gb|AAA73382.1| unnamed protein product [Arabidopsis thaliana]          88   6e-16
ref|XP_002316803.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_003556542.1| PREDICTED: DNA-damage-repair/toleration prot...    83   3e-14
ref|XP_002281743.1| PREDICTED: DNA-damage-repair/toleration prot...    81   1e-13

>ref|NP_174336.1| DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana]
           gi|20141383|sp|P42698.2|DR111_ARATH RecName:
           Full=DNA-damage-repair/toleration protein DRT111,
           chloroplastic; Flags: Precursor
           gi|6634771|gb|AAF19751.1|AC009917_10 Strong similarity
           to gi|1169200 DNA-Damage-Repair/Toleration protein
           (DRT111) precurser, and contains a G-patch PF|01585
           domain and RNA recognition PF|00076 motif. EST
           gb|AA395591 comes from this gene [Arabidopsis thaliana]
           gi|15028005|gb|AAK76533.1| putative DNA damage repair
           protein [Arabidopsis thaliana]
           gi|20259641|gb|AAM14338.1| putative DNA damage repair
           protein [Arabidopsis thaliana]
           gi|332193110|gb|AEE31231.1| DNA-damage-repair/toleration
           protein DRT111 [Arabidopsis thaliana]
          Length = 387

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 52/94 (55%), Positives = 62/94 (65%), Gaps = 5/94 (5%)
 Frame = +1

Query: 1   SATKLAPPTLRKP--FPPPQTILXXXXXXXXXXXXXXXXXXDENTNPN---PSKEMISAA 165
           S+TK+APPTLRKP  F PPQTIL                    N++ +   P+ E  + +
Sbjct: 28  SSTKMAPPTLRKPPAFAPPQTILRPLNKPKPIVSAPYKPPPPSNSSQSVLIPANES-APS 86

Query: 166 FQPALVGVTSSVIEEYDPSRPNDYEEYRREKKRK 267
            QPALVGVTSSVIEEYDP+RPNDYEEY+REKKRK
Sbjct: 87  HQPALVGVTSSVIEEYDPARPNDYEEYKREKKRK 120


>gb|AAA73382.1| unnamed protein product [Arabidopsis thaliana]
          Length = 383

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/90 (53%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
 Frame = +1

Query: 4   ATKLAPPTLRKP--FPPPQTILXXXXXXXXXXXXXXXXXXDENTNPNPSKEMISAAFQPA 177
           +TK+APPTLRKP  F PPQTIL                  + + +        + + QPA
Sbjct: 29  STKMAPPTLRKPPAFAPPQTILRPLNKPKPIVSAPYKPPPNSSQSVLIPANESAPSHQPA 88

Query: 178 LVGVTSSVIEEYDPSRPNDYEEYRREKKRK 267
           LVGVTSSVIEEYDP+RPNDYEEY+REKKRK
Sbjct: 89  LVGVTSSVIEEYDPARPNDYEEYKREKKRK 118


>ref|XP_002316803.1| predicted protein [Populus trichocarpa] gi|222859868|gb|EEE97415.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 50/102 (49%), Positives = 58/102 (56%), Gaps = 13/102 (12%)
 Frame = +1

Query: 1   SATKLAPPTLRKPFPPP--QTILXXXXXXXXXXXXXXXXXXDENTNPNPSKEMIS----- 159
           ++T +APPTLRKP PPP  QTIL                       P PSK ++S     
Sbjct: 29  TSTLMAPPTLRKPMPPPPPQTILK------------------SQNKPKPSKTLLSPAPPV 70

Query: 160 ------AAFQPALVGVTSSVIEEYDPSRPNDYEEYRREKKRK 267
                  A QPALVGV S VIEEYDP+RPNDY++YRREKKRK
Sbjct: 71  TVLPDEVAAQPALVGVNSVVIEEYDPARPNDYDDYRREKKRK 112


>ref|XP_003556542.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
           chloroplastic-like [Glycine max]
          Length = 392

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/92 (48%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
 Frame = +1

Query: 1   SATKLAPPTLRKP---FPPPQTILXXXXXXXXXXXXXXXXXXDENTNPNPSKEMISAAFQ 171
           S+TK+AP TLRKP   F PPQT+L                    +  P P      A  Q
Sbjct: 28  SSTKMAPATLRKPASLFAPPQTLLRAQPKPRPTTTTIPKPILSSSPAPPPD----DALLQ 83

Query: 172 PALVGVTSSVIEEYDPSRPNDYEEYRREKKRK 267
           PALVGV S+V+EEYDP+RPNDYE+YRR++KRK
Sbjct: 84  PALVGVQSTVLEEYDPTRPNDYEDYRRDRKRK 115


>ref|XP_002281743.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
           chloroplastic [Vitis vinifera]
          Length = 383

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 8/97 (8%)
 Frame = +1

Query: 1   SATKLAPPTLRKP---FPPPQTILXXXXXXXXXXXXXXXXXX-DENTNPNPS----KEMI 156
           S+ K+AP  LRKP   F PPQ++L                        P+PS    +   
Sbjct: 28  SSAKMAPAALRKPSSVFAPPQSVLKTQHAQAKPKTLNSSKILISPGLAPSPSVLPNEGAR 87

Query: 157 SAAFQPALVGVTSSVIEEYDPSRPNDYEEYRREKKRK 267
           S +FQPALVGVTSSV+EEYDP+RPNDYE+YRRE+KRK
Sbjct: 88  SPSFQPALVGVTSSVVEEYDPARPNDYEDYRRERKRK 124


Top